RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 TTC26A0AVF1 554 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 ESYT2A0FGR8 921 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 PIPSLA2A3N6 862 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 TMEM89A2RUT3 159 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 ANKUB1A6NFN9 424 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 HEPACAM2A8MVW5 462 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 FAM157AC9JC47 383 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 SLC28A1O00337 649 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 CES2O00748 559 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 FLRT2O43155 660 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 ZNF264O43296 627 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 ARHGEF9O43307 516 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 GRID2O43424 1007 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 SUV39H1O43463 412 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 PRAMEF10O60809 474 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 SAP30O75446 220 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 RAD51DO75771 328 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 CABYRO75952 493 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 LGI1O95970 557 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 IVLP07476 585 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 FHP07954 510 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 INSRRP14616 1297 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 ZNF18P17022 549 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 SYKP43405 635 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 FNTAP49354 379 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 RGS4P49798 205 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 VAV2P52735 878 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 LBX1P52954 281 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 CACNA2D1P54289 1103 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 NCKAP1LP55160 1127 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 MTCP1P56278 107 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 NUCB2P80303 420 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 E2F1Q01094 437 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 STIM1Q13586 685 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 HLXQ14774 488 aaPredicted RBP4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 DECR1Q16698 335 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 CTU2Q2VPK5 515 aaKnown RBP4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 ADPRMQ3LIE5 342 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 PIP5KL1Q5T9C9 394 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 ATF7IP2Q5U623 682 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 ATL3Q6DD88 541 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 DEGS2Q6QHC5 323 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 SIGLEC15Q6ZMC9 328 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 TRILQ7L0X0 811 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 TRMT11Q7Z4G4 463 aaKnown RBP4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 GPR142Q7Z601 462 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 TRIM74Q86UV6 250 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 TRIM73Q86UV7 250 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 ZC3HC1Q86WB0 502 aaKnown RBP4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 CIR1Q86X95 450 aaPredicted RBP4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 TBC1D10CQ8IV04 446 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 UBQLNLQ8IYU4 475 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 CSGALNACT2Q8N6G5 542 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 GJC3Q8NFK1 279 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 ACER1Q8TDN7 264 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 LARP4BQ92615 738 aaKnown RBP4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 ATOH1Q92858 354 aaPredicted RBP4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 SIGLEC10Q96LC7 697 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 BPIFA3Q9BQP9 254 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 C11orf70Q9BRQ4 267 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 ALG12Q9BV10 488 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 IFT27Q9BW83 186 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 PINK1Q9BXM7 581 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 PKIBQ9C010 78 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 ZSCAN16Q9H4T2 348 aaPredicted RBP4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 C8orf33Q9H7E9 229 aaPredicted RBP4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 AGO3Q9H9G7 860 aaKnown RBP4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 LY9Q9HBG7 655 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 SPACA1Q9HBV2 294 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 HHATLQ9HCP6 504 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 WDR6Q9NNW5 1121 aaKnown RBP4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 TXNRD2Q9NNW7 524 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 RNF146Q9NTX7 359 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 FAM120CQ9NX05 1096 aaKnown RBP4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 KCNJ14Q9UNX9 436 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 SF3B1O75533 1304 aaKnown RBP eCLIP4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 NEDD4P46934 1319 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 STK36Q9NRP7 1315 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 A0A1B0GTW7 788 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 TMEM8BA6NDV4 472 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 SMCO2A6NFE2 343 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 H3BMM5 538 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 LAD1O00515 517 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 MAP2K7O14733 419 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 NDUFS4O43181 175 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 KRT86O43790 486 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 PFKFB2O60825 505 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 ATP2C2O75185 946 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 OR6A2O95222 327 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 PROS1P07225 676 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 AKR1A1P14550 325 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 CPA3P15088 417 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 SRD5A1P18405 259 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 HNF1AP20823 631 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 DDX6P26196 483 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 U2AF2P26368 475 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 FCGR2BP31994 310 aaPredicted RBP4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 ATP5C1P36542 298 aaKnown RBP4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 ASCL1P50553 236 aa4.94□□□□□ -1.62
VPS35P1-201ENST00000563400 NOP14P78316 857 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms