RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 RAB41Q5JT25 222 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 REEP3Q6NUK4 255 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 ALKAL1Q6UXT8 129 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TUBA1AQ71U36 451 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 GALNT7Q86SF2 657 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TREML1Q86YW5 311 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 PKP4Q99569 1192 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 OR51B5Q9H339 312 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 MVB12BQ9H7P6 319 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 ANKRA2Q9H9E1 313 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TCF7L1Q9HCS4 588 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 SLC35C2Q9NQQ7 365 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 PRKAB1Q9Y478 270 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 CLCA3PQ9Y6N3 262 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 FABP12A6NFH5 140 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 FAM170BA6NMN3 283 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 ANXA2P2A6NMY6 339 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 DRGXA6NNA5 263 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 ZBTB42B2RXF5 422 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 EIF3FO00303 357 aaPredicted RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 SCAMP2O15127 329 aaKnown RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 ACOX3O15254 700 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 HTRA2O43464 458 aaPredicted RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 ENTPD6O75354 484 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 CCNKO75909 580 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 ANXA2P07355 339 aaKnown RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TIA1P31483 386 aaKnown RBP eCLIP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 DGKEP52429 567 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 INAVAQ3KP66 663 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TP53INP1Q96A56 240 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 ADAP2Q9NPF8 381 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 PHF24Q9UPV7 400 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 G3V2L1 256 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 AGXTP21549 392 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 CXCR1P25024 350 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 CTSOP43234 321 aaPredicted RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 SEPHS1P49903 392 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 COLEC12Q5KU26 742 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 CDHR3Q6ZTQ4 885 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 ANKFN1Q8N957 763 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 ZNF689Q96CS4 500 aaPredicted RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 EPYCQ99645 322 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 HERPUD2Q9BSE4 406 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 IFT46Q9NQC8 304 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 SNTG1Q9NSN8 517 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 CCM2LQ9NUG4 571 aaPredicted RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 IFT52Q9Y366 437 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 H0YJX3 145 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 NPC1O15118 1278 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TGM5O43548 720 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 CPNE3O75131 537 aaKnown RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 REM1O75628 298 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 IFNA6P05013 189 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 CD9P21926 228 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 GNALP38405 381 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 BLOC1S3Q6QNY0 202 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 MCEMP1Q8IX19 187 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 KRTCAP2Q8N6L1 136 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 LMX1AQ8TE12 382 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 JSRP1Q96MG2 331 aaPredicted RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 P2RY13Q9BPV8 354 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 MED28Q9H204 178 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 SLC2A4RGQ9NR83 387 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 SERINC1Q9NRX5 453 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 GALNT8Q9NY28 637 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 EURLQ9NYK6 297 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 MBD2Q9UBB5 411 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 KCNK6Q9Y257 313 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TMEM5Q9Y2B1 443 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 ZNF670-ZNF695F2Z2N8 137 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 ITGA10O75578 1167 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 KLF8O95600 359 aaPredicted RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TIMP1P01033 207 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 BMP8BP34820 402 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 KCNC1P48547 511 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TBPL1P62380 186 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 FCHO2Q0JRZ9 810 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TSTQ16762 297 aaKnown RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 DPY19L3Q6ZPD9 716 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 BMP8AQ7Z5Y6 402 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TICAM1Q8IUC6 712 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 HDAC2Q92769 488 aaKnown RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 FBXL20Q96IG2 436 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 PLEKHA1Q9HB21 404 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TRIM39Q9HCM9 518 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TMEM45AQ9NWC5 275 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 GIMAP2Q9UG22 337 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 SPIN1Q9Y657 262 aaPredicted RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 FAM25EA8MYX2 175 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TFECO14948 347 aaPredicted RBP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 BPIP17213 487 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 CSTF2P33240 577 aaKnown RBP eCLIP6.69□□□□□ -1.34
AP4E1-203ENST00000560508 SPINT3P49223 89 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 PPP2R2BQ00005 443 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 ZNF423Q2M1K9 1284 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 KIAA1161Q6NSJ0 714 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 NXPE4Q6UWF7 544 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TUBA1CQ9BQE3 449 aa6.69□□□□□ -1.34
AP4E1-203ENST00000560508 TBL1XR1Q9BZK7 514 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms