RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ZNF577Q9BSK1 485 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 TCHPQ9BT92 498 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 THUMPD2Q9BTF0 503 aaKnown RBP3.32□□□□□ -1.88
SPG11-218ENST00000559754 MCRIP2Q9BUT9 160 aaKnown RBP3.32□□□□□ -1.88
SPG11-218ENST00000559754 FNDC11Q9BVV2 318 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 TRIM15Q9C019 465 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 TMEM245Q9H330 911 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 DPAGT1Q9H3H5 408 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 ECT2Q9H8V3 914 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 CDH20Q9HBT6 801 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 SIX2Q9NPC8 291 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 SOHLH2Q9NX45 425 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 PTTG2Q9NZH5 202 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 FOXA2Q9Y261 457 aaPredicted RBP3.32□□□□□ -1.88
SPG11-218ENST00000559754 B3GALT5Q9Y2C3 310 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 EXOC6BQ9Y2D4 811 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 U3KQV3 271 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 KDRP35968 1356 aa3.32□□□□□ -1.88
SPG11-218ENST00000559754 SMCHD1A6NHR9 2005 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 DISP3Q9P2K9 1392 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 F8WDY8 70 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 H0YCG3 227 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 AP3B1O00203 1094 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 PLK4O00444 970 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 SLC22A2O15244 555 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 OR10H2O60403 315 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 AK1P00568 194 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 IGHV2-70P01814 119 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 CXCL10P02778 98 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 KRT6BP04259 564 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 KRT8P05787 483 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 PGK2P07205 417 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 H1F0P07305 194 aaKnown RBP3.31□□□□□ -1.88
SPG11-218ENST00000559754 HMBSP08397 361 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 PDHBP11177 359 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 PRG2P13727 222 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 NCF1P14598 390 aaPredicted RBP3.31□□□□□ -1.88
SPG11-218ENST00000559754 EPCAMP16422 314 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 CKMT2P17540 419 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 MPZP25189 248 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 KRT6CP48668 564 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 MAPK12P53778 367 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 ACTR1AP61163 376 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 RPS18P62269 152 aaKnown RBP3.31□□□□□ -1.88
SPG11-218ENST00000559754 CUL3Q13618 768 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 KARSQ15046 597 aaKnown RBP3.31□□□□□ -1.88
SPG11-218ENST00000559754 LPAL2Q16609 132 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 GTDC1Q4AE62 458 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 EPC2Q52LR7 807 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 HERC4Q5GLZ8 1057 aaPredicted RBP3.31□□□□□ -1.88
SPG11-218ENST00000559754 FFAR4Q5NUL3 377 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 OR6B2Q6IFH4 312 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 METTL7BQ6UX53 244 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 TAF8Q7Z7C8 310 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 ADAMTSL2Q86TH1 951 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 ANKRD46Q86W74 232 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 AQP12AQ8IXF9 295 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 TMEM185AQ8NFB2 350 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 CHURC1Q8WUH1 139 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 THRSPQ92748 146 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 SEMA4DQ92854 862 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 TMEM143Q96AN5 459 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 SLCO4A1Q96BD0 722 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 ZNF689Q96CS4 500 aaPredicted RBP3.31□□□□□ -1.88
SPG11-218ENST00000559754 GIMAP5Q96F15 307 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 EPSTI1Q96J88 318 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 CNDP1Q96KN2 507 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 FAM81BQ96LP2 452 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 LMF2Q9BU23 707 aaKnown RBP3.31□□□□□ -1.88
SPG11-218ENST00000559754 CCSER1Q9C0I3 900 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 DDX47Q9H0S4 455 aaKnown RBP3.31□□□□□ -1.88
SPG11-218ENST00000559754 RAB17Q9H0T7 212 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 ATG10Q9H0Y0 220 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 NAPBQ9H115 298 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 SEMA6AQ9H2E6 1030 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 HHATLQ9HCP6 504 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 DNAJC4Q9NNZ3 241 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 FANCFQ9NPI8 374 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 OLFML3Q9NRN5 406 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 CENPMQ9NSP4 180 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 ATAD3AQ9NVI7 634 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 RHCGQ9UBD6 479 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 RABL2AQ9UBK7 228 aaPredicted RBP3.31□□□□□ -1.88
SPG11-218ENST00000559754 CACNG5Q9UF02 275 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 KCNK6Q9Y257 313 aa3.31□□□□□ -1.88
SPG11-218ENST00000559754 NCAPD2Q15021 1401 aa3.3□□□□□ -1.88
SPG11-218ENST00000559754 A0A087X002 238 aa3.3□□□□□ -1.88
SPG11-218ENST00000559754 TEX13DA0A0J9YY54 714 aaPredicted RBP3.3□□□□□ -1.88
SPG11-218ENST00000559754 PRR32B1ATL7 298 aa3.3□□□□□ -1.88
SPG11-218ENST00000559754 TLR4O00206 839 aa3.3□□□□□ -1.88
SPG11-218ENST00000559754 TEX28O15482 410 aa3.3□□□□□ -1.88
SPG11-218ENST00000559754 DCXO43602 365 aa3.3□□□□□ -1.88
SPG11-218ENST00000559754 TSC22D2O75157 780 aa3.3□□□□□ -1.88
SPG11-218ENST00000559754 SPAG6O75602 509 aa3.3□□□□□ -1.88
SPG11-218ENST00000559754 IDH1O75874 414 aaKnown RBP3.3□□□□□ -1.88
SPG11-218ENST00000559754 EDN1P05305 212 aa3.3□□□□□ -1.88
SPG11-218ENST00000559754 ANKRD34CP0C6C1 535 aa3.3□□□□□ -1.88
SPG11-218ENST00000559754 DPEP1P16444 411 aa3.3□□□□□ -1.88
SPG11-218ENST00000559754 CYP2A7P20853 494 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms