RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 MTBPQ96DY7 904 aa13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 WDR34Q96EX3 536 aa13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 MVB12AQ96EY5 273 aa13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 PTCD3Q96EY7 689 aaKnown RBP13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 NSUN5Q96P11 429 aaKnown RBP13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 CRB3Q9BUF7 120 aa13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 RBCK1Q9BYM8 510 aa13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 SLC6A16Q9GZN6 736 aa13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 C12orf65Q9H3J6 166 aaKnown RBP13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 WDR54Q9H977 334 aa13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 P4HTMQ9NXG6 502 aa13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 FETUBQ9UGM5 382 aa13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 C3orf18Q9UK00 162 aa13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 ANGPTL3Q9Y5C1 460 aa13.1□□□□□ -0.31
TSPAN3-205ENST00000558745 BSNQ9UPA5 3926 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 SPTA1P02549 2419 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 PPP6CO00743 305 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 SOCS6O14544 535 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 PDGFAP04085 211 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 CD63P08962 238 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 SMIM10L1P0DMW3 83 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 EPB42P16452 691 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 ALOX12P18054 663 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 TSPAN8P19075 237 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 CXCR2P25025 360 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 HNRNPH1P31943 449 aaKnown RBP13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 EMP2P54851 167 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 RGS1Q08116 209 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 GTF2H2Q13888 395 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 PCBP2Q15366 365 aaKnown RBP eCLIP13.09□□□□□ -0.317e-7■■■■■ 27.7
TSPAN3-205ENST00000558745 TSNAXIP1Q2TAA8 658 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 GTF2H2CQ6P1K8 395 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 KIRREL2Q6UWL6 708 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 SH2D5Q6ZV89 423 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 PTRH1Q86Y79 214 aaKnown RBP13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 KRT78Q8N1N4 520 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 TRPV3Q8NET8 790 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 PEX11GQ96HA9 241 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 SMIM10Q96HG1 83 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 CDK15Q96Q40 435 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 F2RL3Q96RI0 385 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 MRPL57Q9BQC6 102 aaKnown RBP13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 FAM117AQ9C073 453 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 NT5DC2Q9H857 520 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 NOL11Q9H8H0 719 aaKnown RBP13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 MAP4K5Q9Y4K4 846 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 HS3ST3B1Q9Y662 390 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 SLC22A7Q9Y694 548 aa13.09□□□□□ -0.31
TSPAN3-205ENST00000558745 HECTD1Q9ULT8 2610 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 A0A1B0GTL3 188 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 ANKDD1BA6NHY2 528 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 IDSB3KWA1 339 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 H0YIG0 161 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 E2F3O00716 465 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 OR7A17O14581 309 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 CHST10O43529 356 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 GALR3O60755 368 aaPredicted RBP13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 SMIM24O75264 130 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 BMP10O95393 424 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 SERPINA6P08185 405 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 PCNAP12004 261 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 KRT15P19012 456 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 MMP11P24347 488 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 CASP2P42575 452 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 XCR1P46094 333 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 PIK3CGP48736 1102 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 CDH13P55290 713 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 BTN3A2P78410 334 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 NFATC3Q12968 1075 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 RBBP7Q16576 425 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 MYLK4Q86YV6 388 aaPredicted RBP13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 APLFQ8IW19 511 aaPredicted RBP13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 ZNF843Q8N446 348 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 OR52B6Q8NGF0 335 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 EFCAB11Q9BUY7 163 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 MRPL46Q9H2W6 279 aaKnown RBP13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 RHBGQ9H310 441 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 EHD1Q9H4M9 534 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 CLMPQ9H6B4 373 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 IPPKQ9H8X2 491 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 ZBTB26Q9HCK0 441 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 PRM3Q9NNZ6 103 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 MKKSQ9NPJ1 570 aaPredicted RBP13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 COPG2Q9UBF2 871 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 MKL2Q9ULH7 1088 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 RNF11Q9Y3C5 154 aa13.08□□□□□ -0.32
TSPAN3-205ENST00000558745 TNRC6AQ8NDV7 1962 aaKnown RBP13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 IGHV3-20A0A0C4DH32 117 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 CCDC189A1A4V9 331 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 LRIT2A6NDA9 550 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 A8MT66 165 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 FAM227AF5H4B4 570 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 SAP18O00422 153 aaKnown RBP13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 PEX12O00623 359 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 PRPF4O43172 522 aaKnown RBP eCLIP13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 DLX3O60479 287 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 CDC123O75794 336 aaPredicted RBP13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 TGFB1P01137 390 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 HEXBP07686 556 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 NEK2P51955 445 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms