RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 ROR2Q01974 943 aaKnown RBP10.12□□□□□ -0.79
TPM1-210ENST00000558264 PMS2P3Q13401 168 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 SIM2Q14190 667 aaPredicted RBP10.12□□□□□ -0.79
TPM1-210ENST00000558264 CTU2Q2VPK5 515 aaKnown RBP10.12□□□□□ -0.79
TPM1-210ENST00000558264 TMEM259Q4ZIN3 620 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 CPZQ66K79 652 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 B3GNT6Q6ZMB0 384 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 MSANTD1Q6ZTZ1 278 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 GPR155Q7Z3F1 870 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 C17orf64Q86WR6 236 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 VPS37AQ8NEZ2 397 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 UCN3Q969E3 161 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 FERD3LQ96RJ6 166 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 RSPH9Q9H1X1 276 aaPredicted RBP10.12□□□□□ -0.79
TPM1-210ENST00000558264 RIBC2Q9H4K1 309 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 TRPV4Q9HBA0 871 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 FBXL12Q9NXK8 326 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 CA5BQ9Y2D0 317 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 SNX8Q9Y5X2 465 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 PLXND1Q9Y4D7 1925 aa10.12□□□□□ -0.79
TPM1-210ENST00000558264 USP34Q70CQ2 3546 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 TRIOO75962 3097 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 PLPP1O14494 284 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 FURINP09958 794 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 HOXB3P14651 431 aaPredicted RBP10.11□□□□□ -0.79
TPM1-210ENST00000558264 OR1E2P47887 323 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 ZNF33BQ06732 778 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 LSAMPQ13449 338 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 ITPRIPL2Q3MIP1 535 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 METRNLQ641Q3 311 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 UNC5DQ6UXZ4 953 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 KCTD8Q6ZWB6 473 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 GPR141Q7Z602 305 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 CYP4Z1Q86W10 505 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 ARL10Q8N8L6 244 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 LINC01555Q8NAE3 123 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 OR5K1Q8NHB7 308 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 OR5K2Q8NHB8 316 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 RAB7BQ96AH8 199 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 COQ8BQ96D53 544 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 RBM4BQ9BQ04 359 aaKnown RBP10.11□□□□□ -0.79
TPM1-210ENST00000558264 RBM4Q9BWF3 364 aaKnown RBP10.11□□□□□ -0.79
TPM1-210ENST00000558264 NPLQ9BXD5 320 aaPredicted RBP10.11□□□□□ -0.79
TPM1-210ENST00000558264 NAA50Q9GZZ1 169 aaKnown RBP10.11□□□□□ -0.79
TPM1-210ENST00000558264 SLC28A3Q9HAS3 691 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 MIEF1Q9NQG6 463 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 C8orf4Q9NR00 106 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 RSL24D1Q9UHA3 163 aaKnown RBP10.11□□□□□ -0.79
TPM1-210ENST00000558264 TMEFF2Q9UIK5 374 aaPredicted RBP10.11□□□□□ -0.79
TPM1-210ENST00000558264 AP3M1Q9Y2T2 418 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 A0A1B0GVG6 124 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 A0A1W2PQU0 124 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 WASHC1A8K0Z3 465 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 K7EQS6 105 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 FOXE1O00358 373 aaPredicted RBP10.11□□□□□ -0.79
TPM1-210ENST00000558264 BMP10O95393 424 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 FABP3P05413 133 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 PCDH1Q08174 1060 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 E2F2Q14209 437 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 MLF2Q15773 248 aaPredicted RBP10.11□□□□□ -0.79
TPM1-210ENST00000558264 CCNYL2Q5T2Q4 361 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 OR2T5Q6IEZ7 315 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 WASH2PQ6VEQ5 465 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 TMEM26Q6ZUK4 368 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 ZBTB46Q86UZ6 589 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 HORMAD1Q86X24 394 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 FAM129CQ86XR2 697 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 RNF130Q86XS8 419 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 DCP2Q8IU60 420 aaKnown RBP10.11□□□□□ -0.79
TPM1-210ENST00000558264 C8orf59Q8N0T1 100 aaPredicted RBP10.11□□□□□ -0.79
TPM1-210ENST00000558264 SYNPOQ8N3V7 929 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 AMER3Q8N944 861 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 ZNF555Q8NEP9 628 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 OR52E4Q8NGH9 312 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 OR2T29Q8NH02 315 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.11□□□□□ -0.791e-6■□□□□ 10.4
TPM1-210ENST00000558264 CNIH3Q8TBE1 160 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 WDR34Q96EX3 536 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 INSM2Q96T92 566 aaPredicted RBP10.11□□□□□ -0.79
TPM1-210ENST00000558264 DCUN1D5Q9BTE7 237 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 TRMT61BQ9BVS5 477 aaKnown RBP10.11□□□□□ -0.79
TPM1-210ENST00000558264 MAGIXQ9H6Y5 334 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 IL1RAPQ9NPH3 570 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 OBP2AQ9NY56 170 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 KLHL20Q9Y2M5 609 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 GPSM3Q9Y4H4 160 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 SNX11Q9Y5W9 270 aa10.11□□□□□ -0.79
TPM1-210ENST00000558264 ANKDD1BA6NHY2 528 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 PDZK1P1A8MUH7 402 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 H0YAE9 185 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 OR1F1O43749 312 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 GCM2O75603 506 aaPredicted RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 LAMP2P13473 410 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 IGFBP5P24593 272 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 TPP2P29144 1249 aaPredicted RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 EPHA2P29317 976 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 CHI3L1P36222 383 aaPredicted RBP10.1□□□□□ -0.79
TPM1-210ENST00000558264 CYP2A13Q16696 494 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 SLC5A12Q1EHB4 618 aa10.1□□□□□ -0.79
TPM1-210ENST00000558264 ANXA8L1Q5VT79 327 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms