RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PCDHGB2Q9Y5G2 931 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 PLXNB3Q9ULL4 1909 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 ALPK3Q96L96 1907 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 A6NL46 340 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 GABRR3A8MPY1 467 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 CENPXA8MT69 81 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 M0R129 80 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 ARHGAP33O14559 1287 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 HOXC11O43248 304 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 PCDH7O60245 1069 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 GKP32189 559 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 CRATP43155 626 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 ALDH9A1P49189 494 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 B4GALNT1Q00973 533 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 GPR50Q13585 617 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 CDH18Q13634 790 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 XKR6Q5GH73 641 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 ANGPTL8Q6UXH0 198 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 GATAD2AQ86YP4 633 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 RAB43Q86YS6 212 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 HJURPQ8NCD3 748 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 OR4A15Q8NGL6 344 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 WDR36Q8NI36 951 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 WDR20Q8TBZ3 569 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 METTL2AQ96IZ6 378 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 MTERF1Q99551 399 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 P2RY13Q9BPV8 354 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 MAPKAP1Q9BPZ7 522 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 BBS2Q9BXC9 721 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 KLF16Q9BXK1 252 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 RNF38Q9H0F5 515 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 MARCH7Q9H992 704 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 THSD1Q9NS62 852 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 CLN6Q9NWW5 311 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 TAS2R9Q9NYW1 312 aa11.37□□□□□ -0.59
VIPAS39-211ENST00000557658 SMAD6O43541 496 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 ADAMTS4O75173 837 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 DDOSTP39656 456 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 HNF4AP41235 474 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 OR1E2P47887 323 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 TUFMP49411 452 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 PFN3P60673 137 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 DMPKQ09013 629 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 ELAVL2Q12926 359 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 TP53BP2Q13625 1128 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 ELOAQ14241 798 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 ARMC4Q5T2S8 1044 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 VASH1Q7L8A9 365 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 CAMKMTQ7Z624 323 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 SLC44A2Q8IWA5 706 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 C2orf69Q8N8R5 385 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 OR9Q2Q8NGE9 314 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 ASIC4Q96FT7 647 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 C2orf49Q9BVC5 232 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 PRM3Q9NNZ6 103 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 HCN4Q9Y3Q4 1203 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 MGAT4DA6NG13 374 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 NPIPB15A6NHN6 443 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 GFYI3L273 518 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 RGS5O15539 181 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 GPX5O75715 221 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 CCNB2O95067 398 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 ANXA4P09525 319 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 CD22P20273 847 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 CSNK1DP48730 415 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 SLC11A1P49279 550 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 LRRC74AQ0VAA2 488 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 PTGES3Q15185 160 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 SF1Q15637 639 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 ATP13A5Q4VNC0 1218 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 NXNL2Q5VZ03 156 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 MFSD14CQ5VZR4 134 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 PLAG1Q6DJT9 500 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 PRSS55Q6UWB4 352 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 C17orf99Q6UX52 265 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 PTCHD4Q6ZW05 846 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 UTS2BQ765I0 119 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 NLRP8Q86W28 1048 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 VRK3Q8IV63 474 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 BBS7Q8IWZ6 715 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 ALG14Q96F25 216 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 DEPDC7Q96QD5 511 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 FAM129BQ96TA1 746 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 TCF25Q9BQ70 676 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 CNPPD1Q9BV87 410 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 TAPBPLQ9BX59 468 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 ASPNQ9BXN1 380 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 EXOSC4Q9NPD3 245 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 TMEM161AQ9NX61 479 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 STOML2Q9UJZ1 356 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 OGDHLQ9ULD0 1010 aa11.36□□□□□ -0.59
VIPAS39-211ENST00000557658 HSD3B1P14060 373 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 POU2F1P14859 743 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 POLR2EP19388 210 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 IDSP22304 550 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 CXCR2P25025 360 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 HSD3B2P26439 372 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 SERPINA4P29622 427 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 NKX3-2P78367 333 aa11.35□□□□□ -0.59
VIPAS39-211ENST00000557658 SSX1Q16384 188 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms