RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 PACSIN2Q9UNF0 486 aaPredicted RBP8.18□□□□□ -1.1
VRK1-206ENST00000557222 MAP1AP78559 2803 aaPredicted RBP8.18□□□□□ -1.1
VRK1-206ENST00000557222 ITPR3Q14573 2671 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 A0A0A6YYC8 382 aaPredicted RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 MAGEB16A2A368 324 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 I3L1I5 382 aaPredicted RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 GFYI3L273 518 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 EIF3FO00303 357 aaPredicted RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 VAPBO95292 243 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 CLDN14O95500 239 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 MPC1LP0DKB6 136 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 ENO3P13929 434 aaPredicted RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 PAMP19021 973 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 TPSB2P20231 275 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 RAB6AP20340 208 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 NMBRP28336 390 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 RPL22P35268 128 aaKnown RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 SKIV2L2P42285 1042 aaKnown RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 ZNF75DP51815 510 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 SESN2P58004 480 aaPredicted RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 RPS15AP62244 130 aaKnown RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 YBX1P67809 324 aaKnown RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 ZNF33BQ06732 778 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 TPSAB1Q15661 275 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 MEP1AQ16819 746 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 KLHL38Q2WGJ6 581 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 FAAH2Q6GMR7 532 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 KIAA0930Q6ICG6 404 aaPredicted RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 SUSD1Q6UWL2 747 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 ZAR1Q86SH2 424 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 SPPL2CQ8IUH8 684 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 LRRC56Q8IYG6 542 aaPredicted RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 EID3Q8N140 333 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 TMEM178AQ8NBL3 297 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 MDS2Q8NDY4 140 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 PLPP5Q8NEB5 264 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 ADAMTS18Q8TE60 1221 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 PHF10Q8WUB8 498 aaKnown RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 ZNF480Q8WV37 535 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 MAIP1Q8WWC4 291 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 ASB11Q8WXH4 323 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 MTFMTQ96DP5 389 aaKnown RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 C14orf79Q96F83 325 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 SCMH1Q96GD3 660 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 GPR137Q96N19 417 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 PKP4Q99569 1192 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 BAG1Q99933 345 aaPredicted RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 UTP23Q9BRU9 249 aaKnown RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 TRIM8Q9BZR9 551 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 VN1R1Q9GZP7 353 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 PCBD2Q9H0N5 130 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 ACSS3Q9H6R3 686 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 MMP25Q9NPA2 562 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 TAC3Q9UHF0 121 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 PCYOX1Q9UHG3 505 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 RUVBL2Q9Y230 463 aaKnown RBP8.17□□□□□ -1.1
VRK1-206ENST00000557222 COMMD10Q9Y6G5 202 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 NIPBLQ6KC79 2804 aaeCLIP8.17□□□□□ -1.1
VRK1-206ENST00000557222 MED13LQ71F56 2210 aa8.17□□□□□ -1.1
VRK1-206ENST00000557222 A0A0U1RQJ8 604 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 KRT87PA6NCN2 255 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 E5RI56 91 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 HAT1O14929 419 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 ZBTB14O43829 449 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 NIPSNAP2O75323 286 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 SLC16A8O95907 504 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 CELA2AP08217 269 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 ETS1P14921 441 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 BCL6P41182 706 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 CLCN7P51798 805 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 GP2P55259 537 aaKnown RBP8.16□□□□□ -1.1
VRK1-206ENST00000557222 SARNPP82979 210 aaKnown RBP8.16□□□□□ -1.1
VRK1-206ENST00000557222 ADORA2A-AS1P86434 159 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 MEF2AQ02078 507 aaPredicted RBP8.16□□□□□ -1.1
VRK1-206ENST00000557222 TUBA3CQ13748 450 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 RPS6KA1Q15418 735 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 C3AR1Q16581 482 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 CPSF6Q16630 551 aaKnown RBP eCLIP8.16□□□□□ -1.1
VRK1-206ENST00000557222 BTBD16Q32M84 506 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 ACSBG2Q5FVE4 666 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 MEI1Q5TIA1 1274 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 NIPAL1Q6NVV3 410 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 NEPROQ6NW34 567 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 TUBA3EQ6PEY2 450 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 CILP2Q8IUL8 1156 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 REXO1L1PQ8IX06 675 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 LMNTD2Q8IXW0 634 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 OTUD6BQ8N6M0 293 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 ACBD4Q8NC06 268 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 FAM98AQ8NCA5 519 aaKnown RBP8.16□□□□□ -1.1
VRK1-206ENST00000557222 CAMKVQ8NCB2 501 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 OR51Q1Q8NH59 317 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 C1orf54Q8WWF1 131 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 KCNJ9Q92806 393 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 TM4SF19Q96DZ7 209 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 MFSD3Q96ES6 412 aa8.16□□□□□ -1.1
VRK1-206ENST00000557222 WDR89Q96FK6 387 aaPredicted RBP8.16□□□□□ -1.1
VRK1-206ENST00000557222 MAGED4Q96JG8 741 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms