RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 DPEP2Q9H4A9 486 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 RAVER2Q9HCJ3 691 aaKnown RBP3.9□□□□□ -1.79
PRPF39-210ENST00000556718 MRPL17Q9NRX2 175 aaKnown RBP3.9□□□□□ -1.79
PRPF39-210ENST00000556718 INTS10Q9NVR2 710 aaKnown RBP3.9□□□□□ -1.79
PRPF39-210ENST00000556718 OR6C2Q9NZP2 312 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 TAAR2Q9P1P5 351 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 KCNK6Q9Y257 313 aa3.9□□□□□ -1.79
PRPF39-210ENST00000556718 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 RASGRF2O14827 1237 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 BUB3O43684 328 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 SSX5O60225 188 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 ACSL4O60488 711 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 GLRA3O75311 464 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 GMNNO75496 209 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 CLN5O75503 358 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 KRT36O76013 467 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 ATP1B1P05026 303 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 EDN1P05305 212 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 MMP10P09238 476 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 GOT1P17174 413 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 MARCKSP29966 332 aaPredicted RBP3.89□□□□□ -1.79
PRPF39-210ENST00000556718 SFNP31947 248 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 STIP1P31948 543 aaKnown RBP3.89□□□□□ -1.79
PRPF39-210ENST00000556718 CD86P42081 329 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 ASMTP46597 345 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 DNA2P51530 1060 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 GMFBP60983 142 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 FKBP1BP68106 108 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 IRX4P78413 519 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 KCNJ10P78508 379 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 TRIM29Q14134 588 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 SQLEQ14534 574 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 PTPN14Q15678 1187 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 INAQ16352 499 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 GPR33Q49SQ1 333 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 TECRLQ5HYJ1 363 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 UGT3A1Q6NUS8 523 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 NEK5Q6P3R8 708 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 MFSD7Q6UXD7 560 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 GDPD4Q6W3E5 623 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 RBM43Q6ZSC3 357 aaKnown RBP3.89□□□□□ -1.79
PRPF39-210ENST00000556718 LAX1Q8IWV1 398 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 TMEM99Q8N816 258 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 NIPA2Q8N8Q9 360 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 RNF149Q8NC42 400 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 SLC24A4Q8NFF2 622 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 FAM46BQ96A09 425 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 EPSTI1Q96J88 318 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 C16orf45Q96MC5 204 aaPredicted RBP3.89□□□□□ -1.79
PRPF39-210ENST00000556718 KCNK16Q96T55 309 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 UBAC1Q9BSL1 405 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 ACPTQ9BZG2 426 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 ABCG4Q9H172 646 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 HSD3B7Q9H2F3 369 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 NINJ2Q9NZG7 142 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 ACTR3BQ9P1U1 418 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 KCNN3Q9UGI6 736 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 TEKT2Q9UIF3 430 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 ERVK-19Q9WJR5 959 aa3.89□□□□□ -1.79
PRPF39-210ENST00000556718 DHX29Q7Z478 1369 aaKnown RBP3.89□□□□□ -1.79
PRPF39-210ENST00000556718 A0A0G2JLW4 131 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 CCDC162PA2VCL2 907 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 SLC15A5A6NIM6 579 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 H0YIG0 161 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 CCL24O00175 119 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 TEX28O15482 410 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 PSMD3O43242 534 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 EXTL3O43909 919 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 CDK2AP2O75956 126 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 KRT33AO76009 404 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 MT-ATP6P00846 226 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 ETS1P14921 441 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 UGT1A6P19224 532 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 NR1D1P20393 614 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 RBMS1P29558 406 aaKnown RBP3.88□□□□□ -1.79
PRPF39-210ENST00000556718 CEACAM8P31997 349 aaPredicted RBP3.88□□□□□ -1.79
PRPF39-210ENST00000556718 HPDP32754 393 aaPredicted RBP3.88□□□□□ -1.79
PRPF39-210ENST00000556718 NSFP46459 744 aaKnown RBP3.88□□□□□ -1.79
PRPF39-210ENST00000556718 KCNK10P57789 538 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 SRP54P61011 504 aaKnown RBP3.88□□□□□ -1.79
PRPF39-210ENST00000556718 CDR2Q01850 454 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 GCNT1Q02742 428 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 TRA2AQ13595 282 aaKnown RBP eCLIP3.88□□□□□ -1.79
PRPF39-210ENST00000556718 DNAJC21Q5F1R6 531 aaKnown RBP3.88□□□□□ -1.79
PRPF39-210ENST00000556718 SLC24A5Q71RS6 500 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 FCRLAQ7L513 359 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 TAF8Q7Z7C8 310 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 FAM89BQ8N5H3 189 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 RFLNBQ8N5W9 214 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 LRTM2Q8N967 370 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 SLC37A3Q8NCC5 494 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 CNNM3Q8NE01 707 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 GANCQ8TET4 914 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 SUSD6Q92537 303 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 TM9SF4Q92544 642 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 SEPT8Q92599 483 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 WBP2Q969T9 261 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 DTD2Q96FN9 168 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 SPATA13Q96N96 652 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 GUCD1Q96NT3 240 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms