RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 CHADO15335 359 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 SPINT2O43291 252 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 NUDT21O43809 227 aaKnown RBP4.84□□□□□ -1.63
VRK1-203ENST00000555067 LANCL1O43813 399 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 ATP6V1G1O75348 118 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 RNF224P0DH78 156 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 SMIM18P0DKX4 95 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 EPCAMP16422 314 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 PTPN4P29074 926 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 FMO5P49326 533 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 RAD23BP54727 409 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 HUNKP57058 714 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 SPIBQ01892 262 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 GABPB1Q06547 395 aaPredicted RBP4.84□□□□□ -1.63
VRK1-203ENST00000555067 GAGE2BQ13066 116 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 TMED1Q13445 227 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 VEZF1Q14119 521 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 GK2Q14410 553 aaPredicted RBP4.84□□□□□ -1.63
VRK1-203ENST00000555067 FCN2Q15485 313 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 CTF1Q16619 201 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 PTGISQ16647 500 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 IMMTQ16891 758 aaKnown RBP4.84□□□□□ -1.63
VRK1-203ENST00000555067 KCTD21Q4G0X4 260 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 GAGE2EQ4V326 116 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 CFAP157Q5JU67 520 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 FAM46CQ5VWP2 391 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 SUSD4Q5VX71 490 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 TPGS2Q68CL5 300 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 FAM166AQ6J272 317 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 GAGE2AQ6NT46 116 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 SIGLEC15Q6ZMC9 328 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 TMEM26Q6ZUK4 368 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 RTN4RL2Q86UN3 420 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 FOXRED2Q8IWF2 684 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 RNF148Q8N7C7 305 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 EIF1ADQ8N9N8 165 aaKnown RBP4.84□□□□□ -1.63
VRK1-203ENST00000555067 ZNF75CPQ92670 426 aaPredicted RBP4.84□□□□□ -1.63
VRK1-203ENST00000555067 RND1Q92730 232 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 SPAG8Q99932 426 aaPredicted RBP4.84□□□□□ -1.63
VRK1-203ENST00000555067 C17orf62Q9BQA9 187 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 LMF2Q9BU23 707 aaKnown RBP4.84□□□□□ -1.63
VRK1-203ENST00000555067 ZNF416Q9BWM5 594 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 IDI2Q9BXS1 227 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 ATG10Q9H0Y0 220 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 SIRPDQ9H106 197 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 SEMA6AQ9H2E6 1030 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 SLA2Q9H6Q3 261 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 PIGVQ9NUD9 493 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 TAAR2Q9P1P5 351 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 TXNDC16Q9P2K2 825 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 GAGE2DQ9UEU5 116 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 CHRNA9Q9UGM1 479 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 KCNJ14Q9UNX9 436 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 ENTPD4Q9Y227 616 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 GRIP1Q9Y3R0 1128 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 MFHAS1Q9Y4C4 1052 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 NME7Q9Y5B8 376 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.84□□□□□ -1.639e-13■□□□□ 9.4
VRK1-203ENST00000555067 SNED1Q8TER0 1413 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 XKRY2A2RUG3 117 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 OR2M5A3KFT3 312 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 GOLGA6L9A6NEM1 432 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 PRSS46E5RG02 174 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 KCNN4O15554 427 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 MOCS2O96007 188 aaPredicted RBP4.83□□□□□ -1.64
VRK1-203ENST00000555067 MMP10P09238 476 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 HLA-DOBP13765 273 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 MYL6BP14649 208 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 CPA3P15088 417 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 ZNF18P17022 549 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 BDKRB2P30411 391 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 PTGER4P35408 488 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 TMPOP42166 694 aaKnown RBP4.83□□□□□ -1.64
VRK1-203ENST00000555067 SLC34A1Q06495 639 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 FOXM1Q08050 763 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 ABRQ12979 859 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 PLA2G7Q13093 441 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 CCDC152Q4G0S7 254 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 FRG2Q64ET8 278 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 C18orf63Q68DL7 685 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 ARHGAP22Q7Z5H3 698 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 FAM114A1Q8IWE2 563 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 CHERPQ8IWX8 916 aaKnown RBP4.83□□□□□ -1.64
VRK1-203ENST00000555067 ARHGAP24Q8N264 748 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 SLC5A8Q8N695 610 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 PCDH20Q8N6Y1 951 aaKnown RBP4.83□□□□□ -1.64
VRK1-203ENST00000555067 SSMEM1Q8WWF3 244 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 METTL21AQ8WXB1 218 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 PROX1Q92786 737 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 TAAR8Q969N4 342 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 PIGQQ9BRB3 760 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 TBCDQ9BTW9 1192 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 RBM4Q9BWF3 364 aaKnown RBP4.83□□□□□ -1.64
VRK1-203ENST00000555067 LRRC40Q9H9A6 602 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 MRPL17Q9NRX2 175 aaKnown RBP4.83□□□□□ -1.64
VRK1-203ENST00000555067 PANK4Q9NVE7 773 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 RAI14Q9P0K7 980 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 TINAGQ9UJW2 476 aa4.83□□□□□ -1.64
VRK1-203ENST00000555067 PADI3Q9ULW8 664 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms