RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 SLC25A13Q9UJS0 675 aa10.72□□□□□ -0.69
SRP54-205ENST00000554803 PAIP2BQ9ULR5 123 aaKnown RBP10.72□□□□□ -0.69
SRP54-205ENST00000554803 HS3ST2Q9Y278 367 aa10.72□□□□□ -0.69
SRP54-205ENST00000554803 BTRCQ9Y297 605 aa10.72□□□□□ -0.69
SRP54-205ENST00000554803 TPRKBQ9Y3C4 175 aa10.72□□□□□ -0.69
SRP54-205ENST00000554803 OARD1Q9Y530 152 aa10.72□□□□□ -0.69
SRP54-205ENST00000554803 SPENQ96T58 3664 aaKnown RBP10.72□□□□□ -0.69
SRP54-205ENST00000554803 LRRK1Q38SD2 2015 aa10.72□□□□□ -0.69
SRP54-205ENST00000554803 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.71□□□□□ -0.69
SRP54-205ENST00000554803 TTC34A8MYJ7 566 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 ANKRD66B4E2M5 251 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 C10orf142B7Z368 130 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 CFAP99D6REC4 459 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 CDC7O00311 574 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 UPK1AO00322 258 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 WNT9AO14904 365 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 ZSCAN9O15535 394 aaPredicted RBP10.71□□□□□ -0.69
SRP54-205ENST00000554803 SIGLEC6O43699 453 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 LZTS3O60299 673 aaPredicted RBP10.71□□□□□ -0.69
SRP54-205ENST00000554803 TPST1O60507 370 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 ATE1O95260 518 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 SNAP29O95721 258 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 KRT6AP02538 564 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 KRT6BP04259 564 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 SFTPCP11686 197 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 TSPAN8P19075 237 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 PRPH2P23942 346 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 RBMS1P29558 406 aaKnown RBP10.71□□□□□ -0.69
SRP54-205ENST00000554803 GKP32189 559 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 MC4RP32245 332 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 KRT6CP48668 564 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 RHOAP61586 193 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 ST8SIA6P61647 398 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 DAB2P98082 770 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 CLN3Q13286 438 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 GTF2H2Q13888 395 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 KEAP1Q14145 624 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 GALNT3Q14435 633 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 NR6A1Q15406 480 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 GPR33Q49SQ1 333 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 GGTA1PQ4G0N0 100 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 FNDC3BQ53EP0 1204 aaKnown RBP10.71□□□□□ -0.69
SRP54-205ENST00000554803 C6orf141Q5SZD1 244 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 LRIF1Q5T3J3 769 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 GTF2IRD2BQ6EKJ0 949 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 ANKRD26P1Q6NSI1 321 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 GTF2H2CQ6P1K8 395 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 ERICH5Q6P6B1 374 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 Q6ZSR9 355 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 Q6ZVU0 165 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 USP30Q70CQ3 517 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 RPS27LQ71UM5 84 aaKnown RBP10.71□□□□□ -0.69
SRP54-205ENST00000554803 LDB1Q86U70 411 aaPredicted RBP10.71□□□□□ -0.69
SRP54-205ENST00000554803 GTF2IRD2Q86UP8 949 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 IFNEQ86WN2 208 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 ANKRD13BQ86YJ7 626 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 DTWD1Q8N5C7 304 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 ZNF366Q8N895 744 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 ZBTB8BQ8NAP8 495 aaPredicted RBP10.71□□□□□ -0.69
SRP54-205ENST00000554803 ZNF548Q8NEK5 533 aaPredicted RBP10.71□□□□□ -0.69
SRP54-205ENST00000554803 OR6K2Q8NGY2 324 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 FRS2Q8WU20 508 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 MUL1Q969V5 352 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 TMBIM1Q969X1 311 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 FBXL20Q96IG2 436 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 SLC46A1Q96NT5 459 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 KCNA7Q96RP8 456 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 CCNL2Q96S94 520 aaPredicted RBP10.71□□□□□ -0.69
SRP54-205ENST00000554803 ARHGAP9Q9BRR9 750 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 PAIP1Q9H074 479 aaKnown RBP10.71□□□□□ -0.69
SRP54-205ENST00000554803 NTN4Q9HB63 628 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 LATS2Q9NRM7 1088 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 FAM118AQ9NWS6 357 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 CDC14AQ9UNH5 594 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 SAMD4AQ9UPU9 718 aaKnown RBP10.71□□□□□ -0.69
SRP54-205ENST00000554803 ERGIC3Q9Y282 383 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 NCKAP1Q9Y2A7 1128 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 KCTD3Q9Y597 815 aa10.71□□□□□ -0.69
SRP54-205ENST00000554803 ZFC3H1O60293 1989 aaKnown RBP10.7□□□□□ -0.7
SRP54-205ENST00000554803 A0A096LPI6 279 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 CLDN25C9JDP6 229 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 TLR4O00206 839 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 OR4F21O95013 312 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 ITGB2P05107 769 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 CAPN1P07384 714 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 OCM2P0CE71 109 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 OCMP0CE72 109 aaPredicted RBP10.7□□□□□ -0.7
SRP54-205ENST00000554803 MTHFD1P11586 935 aaKnown RBP10.7□□□□□ -0.7
SRP54-205ENST00000554803 JUNDP17535 347 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 UGT1A6P19224 532 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 UGT1A1P22309 533 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 UGT1A4P22310 534 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 UGT1A3P35503 534 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 UGT1A5P35504 534 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 HMGCLP35914 325 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 GNPDA1P46926 289 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 CSNK1DP48730 415 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 CLCN7P51798 805 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 OR4D2P58180 307 aa10.7□□□□□ -0.7
SRP54-205ENST00000554803 ABHD18Q0P651 414 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms