RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 TRIM40Q6P9F5 258 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 BLOC1S3Q6QNY0 202 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 IKBIPQ70UQ0 350 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 LIX1Q8N485 282 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 RNF175Q8N4F7 328 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 OR4D9Q8NGE8 314 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 WDR48Q8TAF3 677 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 PROKR1Q8TCW9 393 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 GAL3ST3Q96A11 431 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 TESCQ96BS2 214 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 MS4A6EQ96DS6 147 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 ZNF764Q96H86 408 aaPredicted RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 NSL1Q96IY1 281 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 SLC41A2Q96JW4 573 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 PPM1MQ96MI6 270 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 ZNF285Q96NJ3 590 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 TGM7Q96PF1 710 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 KCNC2Q96PR1 638 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 ZBTB18Q99592 522 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 CCDC3Q9BQI4 270 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 TBCDQ9BTW9 1192 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 EDEM2Q9BV94 578 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 ZNF717Q9BY31 904 aaPredicted RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 ZMYND15Q9H091 742 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 OR51B5Q9H339 312 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 ACTL8Q9H568 366 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 DDX31Q9H8H2 851 aaKnown RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 PDE7BQ9NP56 450 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 MYNNQ9NPC7 610 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 TMEM9BQ9NQ34 198 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 SEMA4GQ9NTN9 838 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 ARL8BQ9NVJ2 186 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 PDP2Q9P2J9 529 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 G3BP2Q9UN86 482 aaKnown RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 DLGAP4Q9Y2H0 992 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 DNAH14Q0VDD8 3507 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 USP34Q70CQ2 3546 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 COL5A1P20908 1838 aaPredicted RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 WDR87Q6ZQQ6 2873 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 IGHV5-51A0A0C4DH38 117 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 A0A0J9YVX5 310 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 GNG14A0A1W2PPG7 69 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 ARHGAP10A1A4S6 786 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 SLC9B1P1A6NJY1 282 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 H0YGG7 62 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 CDX4O14627 284 aaPredicted RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 ERI3O43414 337 aaKnown RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 KIF1CO43896 1103 aaKnown RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 GUCY1B2O75343 617 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 RASSF9O75901 435 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 IL6P05231 212 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 RPLP0P05388 317 aaKnown RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 SERPIND1P05546 499 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 T-ENOLP0DO92 83 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 CKMT2P17540 419 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 DDX5P17844 614 aaKnown RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 ACP1P24666 158 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 HPCAL1P37235 193 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 GABRA4P48169 554 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 POLR2JP52435 117 aaKnown RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 EMP3P54852 163 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 KCNK10P57789 538 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 ARF3P61204 181 aaPredicted RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 SKP1P63208 163 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 RAE1P78406 368 aaKnown RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 CFHR1Q03591 330 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 STX5Q13190 355 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 PTGR1Q14914 329 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 TCTE1Q5JU00 501 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 PERM1Q5SV97 790 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 OR4C11Q6IEV9 310 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 ABHD17CQ6PCB6 329 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 PAOXQ6QHF9 649 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 FAM92BQ6ZTR7 304 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 MSANTD1Q6ZTZ1 278 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 ABHD13Q7L211 337 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 CAMKMTQ7Z624 323 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 UBE3DQ7Z6J8 389 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 SNX32Q86XE0 403 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 FUNDC1Q8IVP5 155 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 RIMKLAQ8IXN7 391 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 ZCCHC7Q8N3Z6 543 aaKnown RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 D2HGDHQ8N465 521 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 DNAJC22Q8N4W6 341 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 CSNK1A1LQ8N752 337 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 Q8N9G6 341 aaPredicted RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 OR9I1Q8NGQ6 314 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.29□□□□□ -1.24
TDP1-209ENST00000554180 IFI44Q8TCB0 444 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 KLHL6Q8WZ60 621 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 ATOH1Q92858 354 aaPredicted RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 MTERF3Q96E29 417 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 CNDP2Q96KP4 475 aaKnown RBP7.29□□□□□ -1.24
TDP1-209ENST00000554180 TMEM74Q96NL1 305 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 FCRL4Q96PJ5 515 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 F2RL3Q96RI0 385 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 RTKNQ9BST9 563 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 DPY30Q9C005 99 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 KLHL25Q9H0H3 589 aa7.29□□□□□ -1.24
TDP1-209ENST00000554180 C1orf21Q9H246 121 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms