RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 KCNE4Q8WWG9 221 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 CDCA3Q99618 268 aaPredicted RBP3.11□□□□□ -1.91
SCFD1-210ENST00000553693 CCDC106Q9BWC9 280 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 AP1M1Q9BXS5 423 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 THAP10Q9P2Z0 257 aaPredicted RBP3.11□□□□□ -1.91
SCFD1-210ENST00000553693 BAIAP2L1Q9UHR4 511 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 RNF150Q9ULK6 438 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 SNX8Q9Y5X2 465 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 LRP5O75197 1615 aa3.11□□□□□ -1.91
SCFD1-210ENST00000553693 ZFYVE9O95405 1425 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 BLMP54132 1417 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-210ENST00000553693 PTPRUQ92729 1446 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 BCL9LQ86UU0 1499 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 ARHGEF5Q12774 1597 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 IQCMA0A1B0GVH7 501 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 TCRBV21S2A2A0A5A6 115 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 TSPY2A6NKD2 308 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 CLDN4O14493 209 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 OGTO15294 1046 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 GALR3O60755 368 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-210ENST00000553693 BEST1O76090 585 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 HSP90AB1P08238 724 aaKnown RBP3.1□□□□□ -1.91
SCFD1-210ENST00000553693 MELTFP08582 738 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 TSPY3P0CV98 308 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 TSPY8P0CW00 308 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 AOC1P19801 751 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 BCL3P20749 454 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 TSPY1Q01534 308 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 TRA2AQ13595 282 aaKnown RBP eCLIP3.1□□□□□ -1.91
SCFD1-210ENST00000553693 IL11RAQ14626 422 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 VWC2Q2TAL6 325 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 C6orf163Q5TEZ5 329 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 GPR139Q6DWJ6 353 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 CTR9Q6PD62 1173 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 IL17RELQ6ZVW7 336 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 ENOSF1Q7L5Y1 443 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 CAMKMTQ7Z624 323 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 RCOR2Q8IZ40 523 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 MAML2Q8IZL2 1156 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-210ENST00000553693 OR52B6Q8NGF0 335 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 PROX1Q92786 737 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 TSACCQ96A04 125 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-210ENST00000553693 BTBD9Q96Q07 612 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 GCNAQ96QF7 691 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 ABHD1Q96SE0 405 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 CPNE1Q99829 537 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 JPT2Q9H910 190 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 CNOT10Q9H9A5 744 aaKnown RBP3.1□□□□□ -1.91
SCFD1-210ENST00000553693 OLAHQ9NV23 265 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 NKIRAS2Q9NYR9 191 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 TXNDC16Q9P2K2 825 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 NOL7Q9UMY1 257 aaKnown RBP3.1□□□□□ -1.91
SCFD1-210ENST00000553693 EIF2AK4Q9P2K8 1649 aaKnown RBP3.1□□□□□ -1.91
SCFD1-210ENST00000553693 NOS1P29475 1434 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 ADAMTS13Q76LX8 1427 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 RIMS2Q9UQ26 1411 aa3.1□□□□□ -1.91
SCFD1-210ENST00000553693 ADGRB3O60242 1522 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 NHSL1Q5SYE7 1610 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 TRAV24A0A0B4J272 114 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 A0A1W2PPM1 405 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 FAM170AA1A519 330 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 SYNDIG1LA6NDD5 238 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 APOA4P06727 396 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 CSN3P07498 182 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 CLDN15P56746 228 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 ERVK-16P61578 105 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 FKBP3Q00688 224 aaKnown RBP3.09□□□□□ -1.91
SCFD1-210ENST00000553693 SLC30A6Q6NXT4 461 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 BAIAP2L2Q6UXY1 529 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 CATSPER3Q86XQ3 398 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 OR4N5Q8IXE1 308 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 FGFRL1Q8N441 504 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 TC2NQ8N9U0 490 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 SPATA17Q96L03 361 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 MXD3Q9BW11 206 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 EGLN3Q9H6Z9 239 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 TBC1D13Q9NVG8 400 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 ZNF107Q9UII5 783 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-210ENST00000553693 ANAPC2Q9UJX6 822 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 RPS6KA6Q9UK32 745 aa3.09□□□□□ -1.91
SCFD1-210ENST00000553693 KIF15Q9NS87 1388 aa3.09□□□□□ -1.92
SCFD1-210ENST00000553693 EHBP1L1Q8N3D4 1523 aa3.09□□□□□ -1.92
SCFD1-210ENST00000553693 DUOX2Q9NRD8 1548 aa3.09□□□□□ -1.92
SCFD1-210ENST00000553693 EDDM13A0A1B0GTR0 161 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 hCG_1809904A0A1W2PP81 198 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 A0A1W2PPE2 198 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 A0A1W2PPK0 400 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 A0A1W2PR64 198 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 P4HA2O15460 535 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 PLOD3O60568 738 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 CYTIPO60759 359 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 ACSL3O95573 720 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 ATP5BP06576 529 aaKnown RBP3.08□□□□□ -1.92
SCFD1-210ENST00000553693 PCP11498 1178 aaKnown RBP3.08□□□□□ -1.92
SCFD1-210ENST00000553693 PTMSP20962 102 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 COPB2P35606 906 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 ACTN2P35609 894 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 NNMTP40261 264 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 CCR3P51677 355 aa3.08□□□□□ -1.92
SCFD1-210ENST00000553693 NDST2P52849 883 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms