RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 URODP06132 367 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 CKMT1AP12532 417 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 CXCR2P25025 360 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 PTPN6P29350 595 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 SLC11A2P49281 568 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 BOP1Q14137 746 aaKnown RBP11.91□□□□□ -0.5
HDAC7-230ENST00000552960 E2F2Q14209 437 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 RFPL4BQ6ZWI9 263 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 EIF3MQ7L2H7 374 aaKnown RBP11.91□□□□□ -0.5
HDAC7-230ENST00000552960 ZSWIM9Q86XI8 627 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 TRIM48Q8IWZ4 208 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 RBFAQ8N0V3 343 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 OR10G2Q8NGC3 310 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 OR6F1Q8NGZ6 308 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 IL4I1Q96RQ9 567 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 SLC30A2Q9BRI3 323 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 CCM2Q9BSQ5 444 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 ANKHQ9HCJ1 492 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 SNTG1Q9NSN8 517 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 HCFC1R1Q9NWW0 138 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 RHCGQ9UBD6 479 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 DKK3Q9UBP4 350 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 MYO15AQ9UKN7 3530 aa11.91□□□□□ -0.5
HDAC7-230ENST00000552960 KDELR3O43731 214 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 LAMP1P11279 417 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 ITGALP20701 1170 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 UGT2B10P36537 528 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 PIK3CBP42338 1070 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 HTR3AP46098 478 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 ERVFC1P60507 584 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 TBCEQ15813 527 aaPredicted RBP11.9□□□□□ -0.5
HDAC7-230ENST00000552960 NOXRED1Q6NXP6 359 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 GPR156Q8NFN8 814 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 WFDC5Q8TCV5 224 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 PHOX2BQ99453 314 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 NIPSNAP1Q9BPW8 284 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 OR2B2Q9GZK3 357 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 GABARAPL1Q9H0R8 117 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 ZFYVE1Q9HBF4 777 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 PCDHGB3Q9Y5G1 929 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 ANKRD36A6QL64 1941 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 CR2P20023 1033 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 TNFSF8P32971 234 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 CD83Q01151 205 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 PRKCDQ05655 676 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 CHRNA6Q15825 494 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 DUOXA1Q1HG43 343 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 PTOV1Q86YD1 416 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 B3GNT7Q8NFL0 401 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 ADAMTS19Q8TE59 1207 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 MGLLQ99685 303 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 TRPV5Q9NQA5 729 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 TRPM5Q9NZQ8 1165 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 TRPS1Q9UHF7 1281 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 MKLN1Q9UL63 735 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 INSL5Q9Y5Q6 135 aa11.9□□□□□ -0.5
HDAC7-230ENST00000552960 H3BNC9 293 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 J3KTA2 159 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 FHP07954 510 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 HIST1H2AGP0C0S8 130 aaPredicted RBP11.9□□□□□ -0.51
HDAC7-230ENST00000552960 PRPS2P11908 318 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 PTPN2P17706 415 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 HIST1H2ADP20671 130 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 PPIGQ13427 754 aaKnown RBP eCLIP11.9□□□□□ -0.518e-6■■■■□ 22.7
HDAC7-230ENST00000552960 PTCHD3Q3KNS1 767 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 NEK5Q6P3R8 708 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 UBE2R2Q712K3 238 aaPredicted RBP11.9□□□□□ -0.51
HDAC7-230ENST00000552960 CBLL1Q75N03 491 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 GAREM2Q75VX8 874 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 RAB43Q86YS6 212 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 LGI4Q8N135 537 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 ARMC5Q96C12 935 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 HIST1H2AHQ96KK5 128 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 COL21A1Q96P44 957 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 HIST1H2AJQ99878 128 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 H2AFJQ9BTM1 129 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 NTMT1Q9BV86 223 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 IRF2BPLQ9H1B7 796 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 ZNF556Q9HAH1 456 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 CCDC88CQ9P219 2028 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 MUTYHQ9UIF7 546 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 CLEC4EQ9ULY5 219 aa11.9□□□□□ -0.51
HDAC7-230ENST00000552960 TNFRSF10AO00220 468 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 CDH4P55283 916 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 ITGA1P56199 1179 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 SLAMF1Q13291 335 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 NFATC2Q13469 925 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 TPGS1Q6ZTW0 290 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 SERPINA11Q86U17 422 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 OR7G1Q8NGA0 311 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 GPR151Q8TDV0 419 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 USP7Q93009 1102 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 CEP295NLQ96MC4 621 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 NECTIN4Q96NY8 510 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 TCF25Q9BQ70 676 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 SLC32A1Q9H598 525 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 MRPL17Q9NRX2 175 aaKnown RBP11.89□□□□□ -0.51
HDAC7-230ENST00000552960 DNMT3AQ9Y6K1 912 aaPredicted RBP11.89□□□□□ -0.51
HDAC7-230ENST00000552960 PTPRSQ13332 1948 aa11.89□□□□□ -0.51
HDAC7-230ENST00000552960 FAM172BPA6NC97 362 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms