RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 COX6B1P14854 86 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 ECHS1P30084 290 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 PHBP35232 272 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 RGS4P49798 205 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 CASP6P55212 293 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 CDKN2DP55273 166 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 PMP22Q01453 160 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 SRSF11Q05519 484 aaKnown RBP11.17□□□□□ -0.62
CKAP4-202ENST00000552828 TSTA3Q13630 321 aaPredicted RBP11.17□□□□□ -0.62
CKAP4-202ENST00000552828 TUBA3CQ13748 450 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 C3AR1Q16581 482 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 HECTD2Q5U5R9 776 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 LRRC8EQ6NSJ5 796 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 FAM45BPQ6NSW5 357 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 TUBA3EQ6PEY2 450 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 CYHR1Q6ZMK1 362 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 LANCL3Q6ZV70 420 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 ZC3HC1Q86WB0 502 aaKnown RBP11.17□□□□□ -0.62
CKAP4-202ENST00000552828 PLD3Q8IV08 490 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 CTAGE3PQ8IX95 158 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 ZNF295-AS1Q8N0V1 137 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 BEST3Q8N1M1 668 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 PPFIBP2Q8ND30 876 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 LRRN4CLQ8ND94 238 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 OR9A4Q8NGU2 314 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 OR51Q1Q8NH59 317 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 GIMAP7Q8NHV1 300 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 FAM45AQ8TCE6 357 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 FBF1Q8TES7 1133 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 ANKRD7Q92527 254 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 THAP11Q96EK4 314 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 SCMH1Q96GD3 660 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 GPR137Q96N19 417 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 PRAP1Q96NZ9 151 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 SLC30A3Q99726 388 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 CPNE1Q99829 537 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 RHOJQ9H4E5 214 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 SMYD2Q9NRG4 433 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 TMEM184CQ9NVA4 438 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 NFU1Q9UMS0 254 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 CPAMD8Q8IZJ3 1885 aa11.17□□□□□ -0.62
CKAP4-202ENST00000552828 PKDREJQ9NTG1 2253 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 IGHV3-20A0A0C4DH32 117 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 CXorf49A8MYA2 514 aaPredicted RBP11.16□□□□□ -0.62
CKAP4-202ENST00000552828 CDK2AP1O14519 115 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 PIAS1O75925 651 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 MPC1LP0DKB6 136 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 SAT1P21673 171 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 GP5P40197 560 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 CD96P40200 585 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 BCL6P41182 706 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 XCR1P46094 333 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 AGTR2P50052 363 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 SMSP52788 366 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 RPS15AP62244 130 aaKnown RBP11.16□□□□□ -0.62
CKAP4-202ENST00000552828 TIAL1Q01085 375 aaKnown RBP eCLIP11.16□□□□□ -0.62
CKAP4-202ENST00000552828 PDAP1Q13442 181 aaKnown RBP11.16□□□□□ -0.62
CKAP4-202ENST00000552828 NAB1Q13506 487 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 SLMAPQ14BN4 828 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 EXT1Q16394 746 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 BTBD16Q32M84 506 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 KBTBD12Q3ZCT8 623 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 TEX35Q5T0J7 233 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 TMEM214Q6NUQ4 689 aaKnown RBP11.16□□□□□ -0.62
CKAP4-202ENST00000552828 PAQR3Q6TCH7 311 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 ANKRD37Q7Z713 158 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 SPPL2CQ8IUH8 684 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 SIAH3Q8IW03 269 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 CPNE9Q8IYJ1 553 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 SHISA5Q8N114 240 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 PPM1NQ8N819 430 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 ACBD4Q8NC06 268 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 M1APQ8TC57 530 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 MCOLN3Q8TDD5 553 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 TM4SF19Q96DZ7 209 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 VPS39Q96JC1 886 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 SIGLEC12Q96PQ1 595 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 NPAS2Q99743 824 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 MMP25Q9NPA2 562 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 NINJ2Q9NZG7 142 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 MTORP42345 2549 aa11.16□□□□□ -0.62
CKAP4-202ENST00000552828 FAM95CA0A1B0GW59 222 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 ZBTB14O43829 449 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 MLYCDO95822 493 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 C1QAP02745 245 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 IL10P22301 178 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 IMPA1P29218 277 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 SPRP35270 261 aaPredicted RBP11.15□□□□□ -0.62
CKAP4-202ENST00000552828 SLC12A2P55011 1212 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 IL2P60568 153 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 OR1C1Q15619 314 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 MEP1AQ16819 746 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 MINDY4Q4G0A6 757 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 GRTP1Q5TC63 336 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 PRSS41Q7RTY9 318 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 ADCK2Q7Z695 626 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 CRLF3Q8IUI8 442 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 LGI4Q8N135 537 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 MYO1HQ8N1T3 1032 aa11.15□□□□□ -0.62
CKAP4-202ENST00000552828 PLPP5Q8NEB5 264 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms