RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 STAG3L1P0CL83 205 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 EPCAMP16422 314 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 ZNF23P17027 643 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 ITGA2P17301 1181 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 EPORP19235 508 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 CBLP22681 906 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 HOXA11P31270 313 aaPredicted RBP4.96□□□□□ -1.62
CPSF6-206ENST00000550987 TIA1P31483 386 aaKnown RBP eCLIP4.96□□□□□ -1.621e-9■□□□□ 11.2
CPSF6-206ENST00000550987 PTGER4P35408 488 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 AHRP35869 848 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 NR4A2P43354 598 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 TNNT2P45379 298 aaPredicted RBP4.96□□□□□ -1.62
CPSF6-206ENST00000550987 CX3CL1P78423 397 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 FOLH1Q04609 750 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 RELQ04864 619 aaPredicted RBP4.96□□□□□ -1.62
CPSF6-206ENST00000550987 DLG1Q12959 904 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 SLC39A14Q15043 492 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 LBHQ53QV2 105 aaPredicted RBP4.96□□□□□ -1.62
CPSF6-206ENST00000550987 ETFRF1Q6IPR1 90 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 PLXDC2Q6UX71 529 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 GFRALQ6UXV0 394 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 RPAINQ86UA6 219 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 TMEM219Q86XT9 240 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 GPALPP1Q8IXQ4 340 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 CDK20Q8IZL9 346 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 MUC20Q8N307 709 aaPredicted RBP4.96□□□□□ -1.62
CPSF6-206ENST00000550987 ZNF114Q8NC26 417 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 OR13J1Q8NGT2 312 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 TBC1D31Q96DN5 1066 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 SGF29Q96ES7 293 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 ZNF385AQ96PM9 386 aaKnown RBP4.96□□□□□ -1.62
CPSF6-206ENST00000550987 ATP6V0BQ99437 205 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 VN1R1Q9GZP7 353 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 SRD5A3Q9H8P0 318 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 GSN-AS1Q9NRJ2 163 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 SLC38A7Q9NVC3 462 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 WNT16Q9UBV4 365 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 LRWD1Q9UFC0 647 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 CHKBQ9Y259 395 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 PCDHGA1Q9Y5H4 931 aa4.96□□□□□ -1.62
CPSF6-206ENST00000550987 A0A0G2JNG1 304 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 CLRN2A0PK11 232 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 HNRNPCL2B2RXH8 293 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 GAPDHSO14556 408 aaPredicted RBP4.95□□□□□ -1.62
CPSF6-206ENST00000550987 FLRT2O43155 660 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 PRAF2O60831 178 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 WDPCPO95876 746 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 OLFM2O95897 454 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 SLC16A8O95907 504 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 ANKRD34CP0C6C1 535 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 HAPLN1P10915 354 aaPredicted RBP4.95□□□□□ -1.62
CPSF6-206ENST00000550987 CYP2B6P20813 491 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 ARRB2P32121 409 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 SERPINB6P35237 376 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 FRKP42685 505 aaPredicted RBP4.95□□□□□ -1.62
CPSF6-206ENST00000550987 CLK1P49759 484 aaKnown RBP4.95□□□□□ -1.62
CPSF6-206ENST00000550987 MAT1AQ00266 395 aaKnown RBP4.95□□□□□ -1.62
CPSF6-206ENST00000550987 RUNX1T1Q06455 604 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 PPIL2Q13356 520 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 LASP1Q14847 261 aaKnown RBP4.95□□□□□ -1.62
CPSF6-206ENST00000550987 KIR2DS5Q14953 304 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 NONOQ15233 471 aaKnown RBP eCLIP4.95□□□□□ -1.622e-6■■■□□ 18.6
CPSF6-206ENST00000550987 SF3B4Q15427 424 aaKnown RBP eCLIP4.95□□□□□ -1.62
CPSF6-206ENST00000550987 IFI44LQ53G44 452 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 TATDN1Q6P1N9 297 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 ZNF549Q6P9A3 640 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 NUDT13Q86X67 352 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 CROCCP3Q8IVE0 287 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 UBALD2Q8IYN6 164 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 LGI2Q8N0V4 545 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 FBXL14Q8N1E6 418 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 NEK11Q8NG66 645 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 OR4K1Q8NGD4 311 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 SPATA22Q8NHS9 363 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 SLC26A7Q8TE54 656 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 IRGQQ8WZA9 623 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 SGK494Q96LW2 274 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 GAL3ST4Q96RP7 486 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 S1PR5Q9H228 398 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 TNMDQ9H2S6 317 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 COMMD8Q9NX08 183 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 SPG21Q9NZD8 308 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 PCDHA7Q9UN72 937 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 MGAQ8IWI9 3026 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 ATG2AQ2TAZ0 1938 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 CACNA1DQ01668 2161 aa4.95□□□□□ -1.62
CPSF6-206ENST00000550987 HIVEP1P15822 2718 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 TRAV24A0A0B4J272 114 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 TEX13DA0A0J9YY54 714 aaPredicted RBP4.94□□□□□ -1.62
CPSF6-206ENST00000550987 TTI1O43156 1089 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 SNX3O60493 162 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 CD27P26842 260 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 TUBA1BP68363 451 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 SULT2A1Q06520 285 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 NFATC4Q14934 902 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 RPS6KA1Q15418 735 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 MAPK11Q15759 364 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 NPTX1Q15818 432 aa4.94□□□□□ -1.62
CPSF6-206ENST00000550987 PTGISQ16647 500 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms