RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 SPATA2Q9UM82 520 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 COCHO43405 550 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 MPZL2O60487 215 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 C8AP07357 584 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 YES1P07947 543 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 TARDBPQ13148 414 aaKnown RBP eCLIP9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 GPR17Q13304 367 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 EXOC3L2Q2M3D2 409 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 SETMARQ53H47 684 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 DDI2Q5TDH0 399 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 KRT74Q7RTS7 529 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 LRRC70Q7Z2Q7 622 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 NPAS3Q8IXF0 933 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 CMTM8Q8IZV2 173 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 TEX26Q8N6G2 289 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 KLHL6Q8WZ60 621 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 AP3S1Q92572 193 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 TEFMQ96QE5 360 aaKnown RBP9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 BBS4Q96RK4 519 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 DOHHQ9BU89 302 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 SPRTNQ9H040 489 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 FAM83DQ9H4H8 585 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 TMEM45AQ9NWC5 275 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 GULP1Q9UBP9 304 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 SCAMP1O15126 338 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 SLC16A6O15403 523 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 SDC1P18827 310 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 PAICSP22234 425 aaKnown RBP9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 PTX3P26022 381 aaPredicted RBP9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 WASP42768 502 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 CXCR4P61073 352 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 COX10Q12887 443 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 NKG7Q16617 165 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 ZSWIM7Q19AV6 140 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 MED27Q6P2C8 311 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 ARMCX6Q7L4S7 300 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 METTL4Q8N3J2 472 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 PARP16Q8N5Y8 322 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 SUN5Q8TC36 379 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 FAM129BQ96TA1 746 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 CLMPQ9H6B4 373 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 ZNF222Q9UK12 451 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 IFT52Q9Y366 437 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 HCN4Q9Y3Q4 1203 aa9.16□□□□□ -0.94
CALCOCO1-210ENST00000548263 TLR4O00206 839 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 SLC30A4O14863 429 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 ITGAMP11215 1152 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 CA5AP35218 305 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 HNF1BP35680 557 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 RPL3P39023 403 aaKnown RBP9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 CDKN2CP42773 168 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 CLK3P49761 638 aaKnown RBP9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 LCN1P1Q5VSP4 162 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 MMAAQ8IVH4 418 aaKnown RBP9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 CEP295NLQ96MC4 621 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 TBC1D17Q9HA65 648 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 CCDC177Q9NQR7 707 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 ASAH2Q9NR71 780 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 ZNF225Q9UK10 706 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 A0A1W2PRB8 838 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 DRGXA6NNA5 263 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 NME6O75414 186 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 ERAL1O75616 437 aaKnown RBP9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 UGT2B17O75795 530 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 APOL3O95236 402 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 B3GALT4O96024 378 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 CYP2A6P11509 494 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 ETFAP13804 333 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 SLC6A4P31645 630 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 RFX3P48380 749 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 CCT3P49368 545 aaKnown RBP9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 HNMTP50135 292 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 SUOXP51687 545 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 HNRNPFP52597 415 aaKnown RBP9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 MLLT10P55197 1068 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 SMIM11AP58511 58 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 SLC35A2P78381 396 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 SOWAHCQ53LP3 525 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 CAPN13Q6MZZ7 669 aaPredicted RBP9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 CDH24Q86UP0 819 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 TCEANCQ8N8B7 351 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 FLCNQ8NFG4 579 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 OR9Q2Q8NGE9 314 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 OR8H1Q8NGG4 311 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 GRPEL2Q8TAA5 225 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 DNASE1L2Q92874 299 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 PLD4Q96BZ4 506 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 VMP1Q96GC9 406 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 CCDC115Q96NT0 180 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 MCMBPQ9BTE3 642 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 ANKRA2Q9H9E1 313 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 IL26Q9NPH9 171 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 CLCA2Q9UQC9 943 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 PCDHB11Q9Y5F2 797 aa9.15□□□□□ -0.94
CALCOCO1-210ENST00000548263 H3BM21 787 aa9.15□□□□□ -0.95
CALCOCO1-210ENST00000548263 TNFRSF10BO14763 440 aa9.15□□□□□ -0.95
CALCOCO1-210ENST00000548263 TLX2O43763 284 aaPredicted RBP9.15□□□□□ -0.95
CALCOCO1-210ENST00000548263 C6orf47O95873 294 aa9.15□□□□□ -0.95
CALCOCO1-210ENST00000548263 LIPAP38571 399 aa9.15□□□□□ -0.95
CALCOCO1-210ENST00000548263 MAGEA11P43364 429 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms