RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 H3BMH7 237 aa6□□□□□ -1.45
LTBR-212ENST00000543542 SGK494L7N484 410 aa6□□□□□ -1.45
LTBR-212ENST00000543542 PSMD12O00232 456 aaPredicted RBP6□□□□□ -1.45
LTBR-212ENST00000543542 PPP6CO00743 305 aa6□□□□□ -1.45
LTBR-212ENST00000543542 DYNC1I1O14576 645 aa6□□□□□ -1.45
LTBR-212ENST00000543542 BIRC5O15392 142 aa6□□□□□ -1.45
LTBR-212ENST00000543542 NPHS1O60500 1241 aa6□□□□□ -1.45
LTBR-212ENST00000543542 PRAMEF4O60810 478 aa6□□□□□ -1.45
LTBR-212ENST00000543542 ULK1O75385 1050 aa6□□□□□ -1.45
LTBR-212ENST00000543542 SASH3O75995 380 aa6□□□□□ -1.45
LTBR-212ENST00000543542 KLHL18O94889 574 aa6□□□□□ -1.45
LTBR-212ENST00000543542 ESRRBO95718 433 aa6□□□□□ -1.45
LTBR-212ENST00000543542 PDYNP01213 254 aa6□□□□□ -1.45
LTBR-212ENST00000543542 ENO1P06733 434 aaKnown RBP6□□□□□ -1.45
LTBR-212ENST00000543542 LIFP15018 202 aa6□□□□□ -1.45
LTBR-212ENST00000543542 ALOX12P18054 663 aa6□□□□□ -1.45
LTBR-212ENST00000543542 BGNP21810 368 aa6□□□□□ -1.45
LTBR-212ENST00000543542 PTX3P26022 381 aaPredicted RBP6□□□□□ -1.45
LTBR-212ENST00000543542 RORAP35398 523 aa6□□□□□ -1.45
LTBR-212ENST00000543542 STAT5AP42229 794 aa6□□□□□ -1.45
LTBR-212ENST00000543542 ETV4P43268 484 aa6□□□□□ -1.45
LTBR-212ENST00000543542 SSR2P43308 183 aa6□□□□□ -1.45
LTBR-212ENST00000543542 CCR10P46092 362 aa6□□□□□ -1.45
LTBR-212ENST00000543542 NEK2P51955 445 aa6□□□□□ -1.45
LTBR-212ENST00000543542 EMP3P54852 163 aa6□□□□□ -1.45
LTBR-212ENST00000543542 RPS13P62277 151 aaKnown RBP6□□□□□ -1.45
LTBR-212ENST00000543542 PPP2R2AP63151 447 aa6□□□□□ -1.45
LTBR-212ENST00000543542 TRAF3Q13114 568 aa6□□□□□ -1.45
LTBR-212ENST00000543542 STX3Q13277 289 aa6□□□□□ -1.45
LTBR-212ENST00000543542 CLN3Q13286 438 aa6□□□□□ -1.45
LTBR-212ENST00000543542 DNASE1L3Q13609 305 aa6□□□□□ -1.45
LTBR-212ENST00000543542 FAM53BQ14153 422 aa6□□□□□ -1.45
LTBR-212ENST00000543542 RCN2Q14257 317 aa6□□□□□ -1.45
LTBR-212ENST00000543542 AP5B1Q2VPB7 878 aa6□□□□□ -1.45
LTBR-212ENST00000543542 GGTA1PQ4G0N0 100 aa6□□□□□ -1.45
LTBR-212ENST00000543542 NKAIN1Q4KMZ8 207 aa6□□□□□ -1.45
LTBR-212ENST00000543542 DEFB134Q4QY38 66 aa6□□□□□ -1.45
LTBR-212ENST00000543542 PRAMEF9Q5VWM5 478 aa6□□□□□ -1.45
LTBR-212ENST00000543542 FRG2Q64ET8 278 aa6□□□□□ -1.45
LTBR-212ENST00000543542 ATG16L1Q676U5 607 aa6□□□□□ -1.45
LTBR-212ENST00000543542 ADNP2Q6IQ32 1131 aa6□□□□□ -1.45
LTBR-212ENST00000543542 TMEM214Q6NUQ4 689 aaKnown RBP6□□□□□ -1.45
LTBR-212ENST00000543542 LETMD1Q6P1Q0 360 aa6□□□□□ -1.45
LTBR-212ENST00000543542 SCIMPQ6UWF3 145 aa6□□□□□ -1.45
LTBR-212ENST00000543542 CCDC81Q6ZN84 652 aa6□□□□□ -1.45
LTBR-212ENST00000543542 CUZD1Q86UP6 607 aa6□□□□□ -1.45
LTBR-212ENST00000543542 PROSER1Q86XN7 944 aa6□□□□□ -1.45
LTBR-212ENST00000543542 TRIM42Q8IWZ5 723 aa6□□□□□ -1.45
LTBR-212ENST00000543542 PRSS58Q8IYP2 241 aa6□□□□□ -1.45
LTBR-212ENST00000543542 RNF175Q8N4F7 328 aa6□□□□□ -1.45
LTBR-212ENST00000543542 AFAP1L2Q8N4X5 818 aa6□□□□□ -1.45
LTBR-212ENST00000543542 DTWD1Q8N5C7 304 aa6□□□□□ -1.45
LTBR-212ENST00000543542 ENDOVQ8N8Q3 282 aaKnown RBP6□□□□□ -1.45
LTBR-212ENST00000543542 L3MBTL4Q8NA19 623 aa6□□□□□ -1.45
LTBR-212ENST00000543542 HUS1BQ8NHY5 278 aa6□□□□□ -1.45
LTBR-212ENST00000543542 AGR3Q8TD06 166 aa6□□□□□ -1.45
LTBR-212ENST00000543542 CREB3L4Q8TEY5 395 aa6□□□□□ -1.45
LTBR-212ENST00000543542 AGAP11Q8TF27 550 aa6□□□□□ -1.45
LTBR-212ENST00000543542 ZNF473Q8WTR7 871 aaKnown RBP6□□□□□ -1.45
LTBR-212ENST00000543542 ZDHHC19Q8WVZ1 309 aaPredicted RBP6□□□□□ -1.45
LTBR-212ENST00000543542 GAL3ST3Q96A11 431 aa6□□□□□ -1.45
LTBR-212ENST00000543542 RGMAQ96B86 450 aa6□□□□□ -1.45
LTBR-212ENST00000543542 MIEF2Q96C03 454 aa6□□□□□ -1.45
LTBR-212ENST00000543542 MVB12AQ96EY5 273 aa6□□□□□ -1.45
LTBR-212ENST00000543542 C10orf90Q96M02 699 aa6□□□□□ -1.45
LTBR-212ENST00000543542 LRFN5Q96NI6 719 aa6□□□□□ -1.45
LTBR-212ENST00000543542 CNTNAP3BQ96NU0 1288 aa6□□□□□ -1.45
LTBR-212ENST00000543542 GBP5Q96PP8 586 aa6□□□□□ -1.45
LTBR-212ENST00000543542 KCNC2Q96PR1 638 aa6□□□□□ -1.45
LTBR-212ENST00000543542 FRG2BQ96QU4 278 aa6□□□□□ -1.45
LTBR-212ENST00000543542 F2RL3Q96RI0 385 aa6□□□□□ -1.45
LTBR-212ENST00000543542 KCNA7Q96RP8 456 aa6□□□□□ -1.45
LTBR-212ENST00000543542 CCNL2Q96S94 520 aaPredicted RBP6□□□□□ -1.45
LTBR-212ENST00000543542 SERPINI1Q99574 410 aa6□□□□□ -1.45
LTBR-212ENST00000543542 SH3GL2Q99962 352 aa6□□□□□ -1.45
LTBR-212ENST00000543542 TRMOQ9BU70 441 aa6□□□□□ -1.45
LTBR-212ENST00000543542 TMEM121BQ9BXQ6 578 aaPredicted RBP6□□□□□ -1.45
LTBR-212ENST00000543542 CNTNAP3Q9BZ76 1288 aa6□□□□□ -1.45
LTBR-212ENST00000543542 SLC29A3Q9BZD2 475 aa6□□□□□ -1.45
LTBR-212ENST00000543542 SLC6A16Q9GZN6 736 aa6□□□□□ -1.45
LTBR-212ENST00000543542 ROGDIQ9GZN7 287 aa6□□□□□ -1.45
LTBR-212ENST00000543542 OR51B5Q9H339 312 aa6□□□□□ -1.45
LTBR-212ENST00000543542 KLHL31Q9H511 634 aa6□□□□□ -1.45
LTBR-212ENST00000543542 SYNPO2LQ9H987 977 aa6□□□□□ -1.45
LTBR-212ENST00000543542 DMRT3Q9NQL9 472 aa6□□□□□ -1.45
LTBR-212ENST00000543542 ZNF446Q9NWS9 450 aa6□□□□□ -1.45
LTBR-212ENST00000543542 NMRK1Q9NWW6 199 aa6□□□□□ -1.45
LTBR-212ENST00000543542 AHSPQ9NZD4 102 aa6□□□□□ -1.45
LTBR-212ENST00000543542 HCN3Q9P1Z3 774 aa6□□□□□ -1.45
LTBR-212ENST00000543542 TRPC4Q9UBN4 977 aa6□□□□□ -1.45
LTBR-212ENST00000543542 ZNF282Q9UDV7 671 aaPredicted RBP6□□□□□ -1.45
LTBR-212ENST00000543542 ACSL6Q9UKU0 697 aa6□□□□□ -1.45
LTBR-212ENST00000543542 SLC12A4Q9UP95 1085 aa6□□□□□ -1.45
LTBR-212ENST00000543542 FARSAQ9Y285 508 aaKnown RBP6□□□□□ -1.45
LTBR-212ENST00000543542 MRPS2Q9Y399 296 aaKnown RBP6□□□□□ -1.45
LTBR-212ENST00000543542 NAALAD2Q9Y3Q0 740 aa6□□□□□ -1.45
LTBR-212ENST00000543542 TIMM22Q9Y584 194 aa6□□□□□ -1.45
LTBR-212ENST00000543542 SPACA6W5XKT8 324 aa6□□□□□ -1.45
LTBR-212ENST00000543542 SCN3AQ9NY46 2000 aa5.99□□□□□ -1.45
LTBR-212ENST00000543542 ARHGAP10A1A4S6 786 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms