RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 DENRO43583 198 aaKnown RBP12.69□□□□□ -0.38
TNC-212ENST00000542877 MATN1P21941 496 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 CLCNKAP51800 687 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 BTN3A2P78410 334 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 PLEKHS1Q5SXH7 462 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 CCSAPQ6IQ19 270 aaPredicted RBP12.69□□□□□ -0.38
TNC-212ENST00000542877 PYHIN1Q6K0P9 492 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 TFGQ92734 400 aaPredicted RBP12.69□□□□□ -0.38
TNC-212ENST00000542877 BIRC8Q96P09 236 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 TM9SF2Q99805 663 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 METTL8Q9H825 291 aaKnown RBP12.69□□□□□ -0.38
TNC-212ENST00000542877 HSPB11Q9Y547 144 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 GLTPD2A6NH11 291 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 SCAMP1O15126 338 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 RPP14O95059 124 aaKnown RBP12.69□□□□□ -0.38
TNC-212ENST00000542877 FSHRP23945 695 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 NRIP1P48552 1158 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 VAMP2P63027 116 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 GRIK2Q13002 908 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 SCGB2B2Q4G0G5 96 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 HSDL2Q6YN16 418 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 RNF130Q86XS8 419 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 SLC28A3Q9HAS3 691 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 CLCA3PQ9Y6N3 262 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 ZNF726A6NNF4 738 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 CSN2P05814 226 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 CD1DP15813 335 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 SLC6A6P31641 620 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 MSANTD1Q6ZTZ1 278 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 ZDHHC14Q8IZN3 488 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 KLK6Q92876 244 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 TRIB3Q96RU7 358 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 REEP4Q9H6H4 257 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 POLMQ9NP87 494 aaPredicted RBP12.69□□□□□ -0.38
TNC-212ENST00000542877 CREB5Q02930 508 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 PRKCDQ05655 676 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 ST3GAL4Q11206 333 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 ALG1LQ6GMV1 187 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 CEP68Q76N32 757 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 MINDY1Q8N5J2 469 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 SPATA9Q9BWV2 254 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 ASPNQ9BXN1 380 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 OR51B5Q9H339 312 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 OR51I1Q9H343 314 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 VRTNQ9H8Y1 702 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 Q9N2J8 555 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 CENPMQ9NSP4 180 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 TAS2R10Q9NYW0 307 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 ST14Q9Y5Y6 855 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 AURKAO14965 403 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 AOC2O75106 756 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 UQCRC2P22695 453 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 LCN1P31025 176 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 PDX1P52945 283 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 PDGFRLQ15198 375 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 FCRL3Q96P31 734 aaPredicted RBP12.68□□□□□ -0.38
TNC-212ENST00000542877 RDH8Q9NYR8 311 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 CHRNA1P02708 482 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 GRK5P34947 590 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 CMPK2Q5EBM0 449 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 LIPJQ5W064 366 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 ALKBH2Q6NS38 261 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 Q6ZVU0 165 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 ANKFN1Q8N957 763 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 OR9A1PQ8NGU1 263 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 MOAP1Q96BY2 351 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 LRRN3E7EW58 273 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 INMT-MINDY4F8WBC2 141 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 EEDO75530 441 aaKnown RBP12.68□□□□□ -0.38
TNC-212ENST00000542877 ZNF806P0C7X5 589 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 MAGEA11P43364 429 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 RPL6Q02878 288 aaKnown RBP12.68□□□□□ -0.38
TNC-212ENST00000542877 HNRNPA0Q13151 305 aaKnown RBP12.68□□□□□ -0.38
TNC-212ENST00000542877 PTGR1Q14914 329 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 LAPTM4AQ15012 233 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 C6orf183Q5T699 404 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 ENPP7Q6UWV6 458 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 CEP97Q8IW35 865 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 PRSS58Q8IYP2 241 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 DENND1AQ8TEH3 1009 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 JSRP1Q96MG2 331 aaPredicted RBP12.68□□□□□ -0.38
TNC-212ENST00000542877 GTPBP2Q9BX10 602 aaKnown RBP12.68□□□□□ -0.38
TNC-212ENST00000542877 LRRN3Q9H3W5 708 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 DLGAP4Q9Y2H0 992 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 PCDHB11Q9Y5F2 797 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 PCDHGB5Q9Y5G0 923 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 C2orf92A0A1B0GVN3 265 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 SCDO00767 359 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 PROM1O43490 865 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 GABBR2O75899 941 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 HTR1AP08908 422 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 NR2C1P13056 603 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 HSD11B1P28845 292 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 HOXC12P31275 282 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 HLCSP50747 726 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 GRSF1Q12849 480 aaKnown RBP eCLIP12.68□□□□□ -0.38
TNC-212ENST00000542877 CTC1Q2NKJ3 1217 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 GPRC6AQ5T6X5 926 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 RAB12Q6IQ22 244 aa12.68□□□□□ -0.38
TNC-212ENST00000542877 AMIGO1Q86WK6 493 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms