RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 MAD2L1BPQ15013 274 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 HIST2H2ACQ16777 129 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 TUSC1Q2TAM9 212 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF385BQ569K4 471 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 HIST2H2AA3Q6FI13 130 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PDE12Q6L8Q7 609 aaKnown RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 NXPE4Q6UWF7 544 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 UNC5DQ6UXZ4 953 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 IKBIPQ70UQ0 350 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 COMMD6Q7Z4G1 85 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 GALNT5Q7Z7M9 940 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 ZC3H7AQ8IWR0 971 aaKnown RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 SYTL1Q8IYJ3 562 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 OR4A15Q8NGL6 344 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 CNIH3Q8TBE1 160 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 SPPL3Q8TCT6 385 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 FAR1Q8WVX9 515 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 SLC5A11Q8WWX8 675 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 OR8D1Q8WZ84 308 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 UBE2E3Q969T4 207 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PAWRQ96IZ0 340 aaKnown RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 DOHHQ9BU89 302 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 WRAP53Q9BUR4 548 aaKnown RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 FUNDC2Q9BWH2 189 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 RAD21L1Q9H4I0 556 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 TMEM38AQ9H6F2 299 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 TRIM39Q9HCM9 518 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 KRT84Q9NSB2 600 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 TBCCD1Q9NVR7 557 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 GALNT8Q9NY28 637 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 SCN3BQ9NY72 215 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 KIF17Q9P2E2 1029 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 GPR34Q9UPC5 381 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 KIF26AQ9ULI4 1882 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 EDDM13A0A1B0GTR0 161 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 A8MVJ9 347 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 ADAMDEC1O15204 470 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 VEGFDO43915 354 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 NDUFS2O75306 463 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 TNFRSF21O75509 655 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 CLPXO76031 633 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 NUDT7P0C024 238 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 C6P13671 934 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 EPCAMP16422 314 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 HTR1BP28222 390 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 ACADLP28330 430 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 TAP2Q03519 686 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 EMX1Q04741 257 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 BNIP3Q12983 259 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 EIF4HQ15056 248 aaKnown RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 SF1Q15637 639 aaKnown RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 HNRNPA1L2Q32P51 320 aaKnown RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PROX2Q3B8N5 592 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 POM121L1PQ3SYA9 428 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 CATSPEREQ5SY80 951 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 FAM71E1Q6IPT2 247 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 CCDC80Q76M96 950 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 GRASPQ7Z6J2 395 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 GALNT10Q86SR1 603 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 C12orf40Q86WS4 652 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 TRAPPC5Q8IUR0 188 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 CFAP206Q8IYR0 622 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 METTL4Q8N3J2 472 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 SVOPQ8N4V2 548 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 OXR1Q8N573 874 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 ATG16L2Q8NAA4 619 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 GPR156Q8NFN8 814 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 OR2L2Q8NH16 312 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 SETD7Q8WTS6 366 aaKnown RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 IPCEF1Q8WWN9 437 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 ARRDC3Q96B67 414 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PPP1R16AQ96I34 528 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF347Q96SE7 839 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 CSF3RQ99062 836 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 RAD9AQ99638 391 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 OR2AG1Q9H205 316 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 CCDC177Q9NQR7 707 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 SH3BP4Q9P0V3 963 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 WARS2Q9UGM6 360 aaKnown RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 RWDD3Q9Y3V2 267 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PCDHGB3Q9Y5G1 929 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PI15O43692 258 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 XPNPEP2O43895 674 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 GCM2O75603 506 aaPredicted RBP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 DIRAS1O95057 198 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 PAPLNO95428 1278 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 FGBP02675 491 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 EFNA1P20827 205 aaPredicted RBP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 GPR1P46091 355 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 SELENOWP63302 87 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 CSNK2BP67870 215 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 HBA1P69905 142 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 TEKQ02763 1124 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 RPA4Q13156 261 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 PPIGQ13427 754 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 AQP6Q13520 282 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 CAMK2GQ13555 558 aaPredicted RBP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 ELAVL3Q14576 367 aaKnown RBP6.28□□□□□ -1.4
PTPRO-208ENST00000542557 LAPTM4AQ15012 233 aa6.28□□□□□ -1.4
PTPRO-208ENST00000542557 CTF1Q16619 201 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms