RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 RUNX2Q13950 521 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 PCBP2Q15366 365 aaKnown RBP eCLIP9.2□□□□□ -0.94
YBX3-212ENST00000542002 TBCCQ15814 346 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 ERCC6LQ2NKX8 1250 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 FAAH2Q6GMR7 532 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 TCTN3Q6NUS6 607 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 RPS27LQ71UM5 84 aaKnown RBP9.2□□□□□ -0.94
YBX3-212ENST00000542002 LRRC70Q7Z2Q7 622 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 UBE3DQ7Z6J8 389 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 RAB43Q86YS6 212 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 RNF175Q8N4F7 328 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 TEX9Q8N6V9 391 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 TMEM102Q8N9M5 508 aaPredicted RBP9.2□□□□□ -0.94
YBX3-212ENST00000542002 TRPV3Q8NET8 790 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 OR2W6PQ8NHA6 318 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 C9orf43Q8TAL5 461 aaPredicted RBP9.2□□□□□ -0.94
YBX3-212ENST00000542002 UBLCP1Q8WVY7 318 aaPredicted RBP9.2□□□□□ -0.94
YBX3-212ENST00000542002 MS4A6EQ96DS6 147 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 PHF21BQ96EK2 531 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 PTCD3Q96EY7 689 aaKnown RBP9.2□□□□□ -0.94
YBX3-212ENST00000542002 F2RL3Q96RI0 385 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 CRB3Q9BUF7 120 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 NUDT9Q9BW91 350 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 CAPS2Q9BXY5 557 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 VN1R1Q9GZP7 353 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 RHBGQ9H310 441 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 ZBTB20Q9HC78 741 aaPredicted RBP9.2□□□□□ -0.94
YBX3-212ENST00000542002 ANKHQ9HCJ1 492 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 MKKSQ9NPJ1 570 aaPredicted RBP9.2□□□□□ -0.94
YBX3-212ENST00000542002 ACSS2Q9NR19 701 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 LANCL2Q9NS86 450 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 SEMA3GQ9NS98 782 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 TMEM216Q9P0N5 145 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 XPR1Q9UBH6 696 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 OPTCQ9UBM4 332 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 FETUBQ9UGM5 382 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 NXT1Q9UKK6 140 aaKnown RBP9.2□□□□□ -0.94
YBX3-212ENST00000542002 MKL2Q9ULH7 1088 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 HEATR5BQ9P2D3 2071 aa9.2□□□□□ -0.94
YBX3-212ENST00000542002 ANKRD12Q6UB98 2062 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 IGHV3-20A0A0C4DH32 117 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 A0A0G2JN53 185 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 CCDC189A1A4V9 331 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 PEX12O00623 359 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 OR7A17O14581 309 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 SUV39H1O43463 412 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 CHST10O43529 356 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 HEXBP07686 556 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 CELA2AP08217 269 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 RBP1P09455 135 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 PYGBP11216 843 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 SFTPCP11686 197 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 EPB42P16452 691 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 CXCR2P25025 360 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 XCR1P46094 333 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 SLCO1A2P46721 670 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 IRF8Q02556 426 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 RGS1Q08116 209 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 C19orf57Q0VDD7 668 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 HERC3Q15034 1050 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 ADPRMQ3LIE5 342 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 TOR1AIP1Q5JTV8 583 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 LGSNQ5TDP6 509 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 KLC3Q6P597 504 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 TMEM205Q6UW68 189 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 LANCL3Q6ZV70 420 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 ASB18Q6ZVZ8 466 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 GOLGA7Q7Z5G4 137 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 LAS2Q8IYD9 372 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 GALNT16Q8N428 558 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 PTGR2Q8N8N7 351 aaPredicted RBP9.19□□□□□ -0.94
YBX3-212ENST00000542002 EPS8L3Q8TE67 593 aaKnown RBP9.19□□□□□ -0.94
YBX3-212ENST00000542002 AENQ8WTP8 325 aaKnown RBP9.19□□□□□ -0.94
YBX3-212ENST00000542002 NACC2Q96BF6 587 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 MTBPQ96DY7 904 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 PEX11GQ96HA9 241 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 SCYL1Q96KG9 808 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 NSUN5Q96P11 429 aaKnown RBP9.19□□□□□ -0.94
YBX3-212ENST00000542002 QRFPRQ96P65 431 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 IP6K3Q96PC2 410 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 CDK15Q96Q40 435 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 MRPL57Q9BQC6 102 aaKnown RBP9.19□□□□□ -0.94
YBX3-212ENST00000542002 SLC25A23Q9BV35 468 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 RBCK1Q9BYM8 510 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 C12orf65Q9H3J6 166 aaKnown RBP9.19□□□□□ -0.94
YBX3-212ENST00000542002 ZNF552Q9H707 407 aaPredicted RBP9.19□□□□□ -0.94
YBX3-212ENST00000542002 ZBTB26Q9HCK0 441 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 PRDM7Q9NQW5 492 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 PSMC3IPQ9P2W1 217 aaPredicted RBP9.19□□□□□ -0.94
YBX3-212ENST00000542002 EMCNQ9ULC0 261 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 RNF11Q9Y3C5 154 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 CCDC88CQ9P219 2028 aa9.19□□□□□ -0.94
YBX3-212ENST00000542002 LOC102723996A0A087X1L8 192 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 MKRN2OSH3BPM6 223 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 PYCARD-AS1I3L0S3 204 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 PRPF4O43172 522 aaKnown RBP eCLIP9.18□□□□□ -0.94
YBX3-212ENST00000542002 DLX3O60479 287 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 SH3BGRLO75368 114 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 CLEC3AO75596 197 aa9.18□□□□□ -0.94
YBX3-212ENST00000542002 CDC123O75794 336 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms