RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CST5P28325 142 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 GGT5P36269 586 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 HTR3AP46098 478 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 DHPSP49366 369 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 PGFP49763 221 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 AGTR2P50052 363 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 MLLT6P55198 1093 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 TIAL1Q01085 375 aaKnown RBP eCLIP5.06□□□□□ -1.6
PROM1-220ENST00000540805 MAD2L1BPQ15013 274 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 TYSND1Q2T9J0 566 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SPANXN2Q5MJ10 180 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 FAM46CQ5VWP2 391 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 CHST9Q7L1S5 443 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 TAF8Q7Z7C8 310 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 ZNF598Q86UK7 904 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 GLCCI1Q86VQ1 547 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 GPSM1Q86YR5 675 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 UBQLNLQ8IYU4 475 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 ZNF557Q8N988 423 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 TTC29Q8NA56 475 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 OR4M2Q8NGB6 313 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 GRPEL2Q8TAA5 225 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SLC13A3Q8WWT9 602 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 ST6GAL2Q96JF0 529 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 UROC1Q96N76 676 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SMOQ99835 787 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SORBS1Q9BX66 1292 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 CFHR5Q9BXR6 569 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 DPY30Q9C005 99 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 GABARAPL1Q9H0R8 117 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SLA2Q9H6Q3 261 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 ZNF304Q9HCX3 659 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 DCAF13Q9NV06 445 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 FBXL12Q9NXK8 326 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 NUFIP1Q9UHK0 495 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 AP3M1Q9Y2T2 418 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 LTBP2Q14767 1821 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 FAM25AB3EWG3 89 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 FAM25CB3EWG5 89 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 FAM25GB3EWG6 89 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CACNB4O00305 520 aaPredicted RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 POLR1CO15160 346 aaPredicted RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 SIGLEC5O15389 551 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 RPLP0P05388 317 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 ITGB1P05556 798 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 POLR2CP19387 275 aaPredicted RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 LIPAP38571 399 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 GPR15P49685 360 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 TGM3Q08188 693 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 SIGLEC14Q08ET2 396 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 SF1Q15637 639 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 TBRG1Q3YBR2 411 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 BCL7AQ4VC05 210 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 TOR2AQ5JU69 321 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ATXN7L2Q5T6C5 722 aaPredicted RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 IL27RAQ6UWB1 636 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ABI3BPQ7Z7G0 1075 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 GPR149Q86SP6 731 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 SLC51BQ86UW2 128 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ZDHHC21Q8IVQ6 265 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 PLPP6Q8IY26 295 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 GPR135Q8IZ08 494 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 OR4K2Q8NGD2 314 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 POP5Q969H6 163 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 UBE2FQ969M7 185 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 VWCEQ96DN2 955 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 NXF2Q9GZY0 626 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 ATG10Q9H0Y0 220 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CDCP1Q9H5V8 836 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 POLMQ9NP87 494 aaPredicted RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 SLC35C2Q9NQQ7 365 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CATSPERZQ9NTU4 200 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CYB5R1Q9UHQ9 305 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ZNF225Q9UK10 706 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 BTBD3Q9Y2F9 522 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 POLR1DQ9Y2S0 133 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 FCF1Q9Y324 198 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 NEUROG3Q9Y4Z2 214 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 KCTD3Q9Y597 815 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 WNT6Q9Y6F9 365 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 ABCA1O95477 2261 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CACNA1CQ13936 2221 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CPED1A4D0V7 1026 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 MROH6A6NGR9 719 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 FAM220BPB1ANY3 271 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CDC7O00311 574 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 CTDSP2O14595 271 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 DSCR3O14972 297 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 SNX4O95219 450 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 NFATC1O95644 943 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 OGNP20774 298 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 EFNA1P20827 205 aaPredicted RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 AZGP1P25311 298 aaKnown RBP5.05□□□□□ -1.6
PROM1-220ENST00000540805 NOS3P29474 1203 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 HTR7P34969 479 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 DDOSTP39656 456 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 RHAGQ02094 409 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 SEMA3AQ14563 771 aa5.05□□□□□ -1.6
PROM1-220ENST00000540805 TAB1Q15750 504 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms