RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 KLHL18O94889 574 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 KLK1P06870 262 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 SYN1P17600 705 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 TGFBR2P37173 567 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 SPIBQ01892 262 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 CSTF3Q12996 717 aaKnown RBP13.51□□□□□ -0.25
UBE3B-210ENST00000539599 SP140Q13342 867 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 INAQ16352 499 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 EXOC3L2Q2M3D2 409 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 GRHL2Q6ISB3 625 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 PAGE2Q7Z2X7 111 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 ADCK1Q86TW2 530 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 CHPT1Q8WUD6 406 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 NEURL2Q9BR09 285 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 SLC35A5Q9BS91 424 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 AKIP1Q9NQ31 210 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 FAM120CQ9NX05 1096 aaKnown RBP13.51□□□□□ -0.25
UBE3B-210ENST00000539599 SCN3BQ9NY72 215 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 TPRKBQ9Y3C4 175 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 LYVE1Q9Y5Y7 322 aa13.51□□□□□ -0.25
UBE3B-210ENST00000539599 CLDN25C9JDP6 229 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 M0QX08 132 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 AGRPO00253 132 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 TNFRSF11BO00300 401 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 PCDH17O14917 1159 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 ATP6V1G1O75348 118 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 LAG3P18627 525 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 POLR2EP19388 210 aaKnown RBP13.5□□□□□ -0.25
UBE3B-210ENST00000539599 ACVR2AP27037 513 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 TAS2R50P59544 299 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 KEAP1Q14145 624 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 ZNF284Q2VY69 593 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 RFX4Q33E94 735 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 ZC3H12BQ5HYM0 836 aaKnown RBP13.5□□□□□ -0.25
UBE3B-210ENST00000539599 LILRA6Q6PI73 481 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 SLCO4C1Q6ZQN7 724 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 SETD9Q8NE22 299 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 OTUB1Q96FW1 271 aaPredicted RBP13.5□□□□□ -0.25
UBE3B-210ENST00000539599 APOL4Q9BPW4 351 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 TDP1Q9NUW8 608 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 SPASTQ9UBP0 616 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 CKAP5Q14008 2032 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 DOCK9Q9BZ29 2069 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 SLC5A10A0PJK1 596 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 H3BM21 787 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 RFXAPO00287 272 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 C9P02748 559 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 IGFBP1P08833 259 aaPredicted RBP13.5□□□□□ -0.25
UBE3B-210ENST00000539599 NPPBP16860 134 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 TIA1P31483 386 aaKnown RBP eCLIP13.5□□□□□ -0.25
UBE3B-210ENST00000539599 POLR2LP62875 67 aaKnown RBP13.5□□□□□ -0.25
UBE3B-210ENST00000539599 NFE2L1Q14494 772 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 SLC5A12Q1EHB4 618 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 TRIM16LQ309B1 348 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 FAHD1Q6P587 224 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 LIPIQ6XZB0 460 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 UTS2BQ765I0 119 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 TRMT11Q7Z4G4 463 aaKnown RBP13.5□□□□□ -0.25
UBE3B-210ENST00000539599 CHTF18Q8WVB6 975 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 UCN3Q969E3 161 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 ZNF566Q969W8 418 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 ZNF347Q96SE7 839 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 EMILIN2Q9BXX0 1053 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 RSPO3Q9BXY4 272 aaPredicted RBP13.5□□□□□ -0.25
UBE3B-210ENST00000539599 TBX21Q9UL17 535 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 SNX8Q9Y5X2 465 aa13.5□□□□□ -0.25
UBE3B-210ENST00000539599 PRAMEF33A0A0G2JMD5 474 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 LOC100506127A0A0U1RQW1 187 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 KRBA1A5PL33 1030 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 PRAMEF10O60809 474 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 ATG13O75143 517 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 MYO1DO94832 1006 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 ARHGEF15O94989 841 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 CATP04040 527 aaKnown RBP13.49□□□□□ -0.25
UBE3B-210ENST00000539599 STSP08842 583 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 CCL5P13501 91 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 JUNDP17535 347 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 IL1RNP18510 177 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 PTPN5P54829 565 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 C2orf80Q0P641 193 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 PPIGQ13427 754 aaKnown RBP eCLIP13.49□□□□□ -0.256e-6■■■□□ 18.4
UBE3B-210ENST00000539599 CDKL4Q5MAI5 379 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 ANKRD33Q7Z3H0 272 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 CLIP4Q8N3C7 705 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 MFSD4AQ8N468 514 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 DNAJB8Q8NHS0 232 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 DYNC2LI1Q8TCX1 351 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 COPS4Q9BT78 406 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 IL36AQ9UHA7 158 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 TMEM98Q9Y2Y6 226 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 SNX11Q9Y5W9 270 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 TCF20Q9UGU0 1960 aaKnown RBP13.49□□□□□ -0.25
UBE3B-210ENST00000539599 A0A0G2JN53 185 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 WASHC1A8K0Z3 465 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 H0YIV9 168 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 M0R082 166 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 SPINT1O43278 529 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 C1orf105O95561 183 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 SOD1P00441 154 aa13.49□□□□□ -0.25
UBE3B-210ENST00000539599 HSMCR30P0CW71 290 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms