RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 KRT73Q86Y46 540 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 NPAS3Q8IXF0 933 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 ADGRG2Q8IZP9 1017 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 LGI4Q8N135 537 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 SLC5A8Q8N695 610 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 Q8N9G6 341 aaPredicted RBP11.7□□□□□ -0.54
CPSF7-218ENST00000537641 VPS37AQ8NEZ2 397 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 OR6F1Q8NGZ6 308 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 SCLYQ96I15 445 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 IGSF21Q96ID5 467 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 LYSMD1Q96S90 227 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 SDHCQ99643 169 aaPredicted RBP11.7□□□□□ -0.54
CPSF7-218ENST00000537641 VN1R3Q9BXE9 311 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 SMURF1Q9HCE7 757 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 DYRK4Q9NR20 520 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 QPCTLQ9NXS2 382 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 GPR83Q9NYM4 423 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 NDUFAF4Q9P032 175 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 VPS29Q9UBQ0 182 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 VPS4AQ9UN37 437 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 PCDHGB2Q9Y5G2 931 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 BRCA2P51587 3418 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 ALPK3Q96L96 1907 aa11.7□□□□□ -0.54
CPSF7-218ENST00000537641 ANKRD34BA5PLL1 514 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 ARRDC5A6NEK1 342 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 CCR7P32248 378 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 HNF1BP35680 557 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 IDH2P48735 452 aaKnown RBP11.69□□□□□ -0.54
CPSF7-218ENST00000537641 NUDT6P53370 316 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 SPIBQ01892 262 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 PCDH1Q08174 1060 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 RBBP4Q09028 425 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 CHIT1Q13231 466 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 GPR50Q13585 617 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 KCNC3Q14003 757 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 RGNQ15493 299 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 PLEKHS1Q5SXH7 462 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 ATAD3CQ5T2N8 411 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 C6orf183Q5T699 404 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 GDPGP1Q6ZNW5 385 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 NANOGNBQ7Z5D8 188 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 NLGN4XQ8N0W4 816 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 CYP4Z2PQ8N1L4 340 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 HJURPQ8NCD3 748 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-218ENST00000537641 ZNF461Q8TAF7 563 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 WDR20Q8TBZ3 569 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 SPPL2AQ8TCT8 520 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 ASB11Q8WXH4 323 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 SH3KBP1Q96B97 665 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 CXorf40BQ96DE9 158 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 TRNT1Q96Q11 434 aaKnown RBP11.69□□□□□ -0.54
CPSF7-218ENST00000537641 COPS8Q99627 209 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 MAPKAP1Q9BPZ7 522 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 CCM2Q9BSQ5 444 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 KLF16Q9BXK1 252 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-218ENST00000537641 RNF167Q9H6Y7 350 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 ZNF556Q9HAH1 456 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 TRPV5Q9NQA5 729 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 SPATA6Q9NWH7 488 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-218ENST00000537641 BTBD3Q9Y2F9 522 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 CAB39Q9Y376 341 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-218ENST00000537641 ZNF451Q9Y4E5 1061 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 N6AMT1Q9Y5N5 214 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 COL4A6Q14031 1691 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 KIAA1671Q9BY89 1806 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 IGLV3-16A0A075B6K0 115 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 H3BQ06 376 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-218ENST00000537641 GFRA2O00451 464 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 PRAMEF4O60810 478 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 PQBP1O60828 265 aaKnown RBP11.69□□□□□ -0.54
CPSF7-218ENST00000537641 TBL1XO60907 577 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 FKTNO75072 461 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 NUDT7P0C024 238 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 LAMP1P11279 417 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 HNF4AP41235 474 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 CSKP41240 450 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 RPS5P46782 204 aaKnown RBP11.69□□□□□ -0.54
CPSF7-218ENST00000537641 CDC42P60953 191 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 ACSM2AQ08AH3 577 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 FCHO2Q0JRZ9 810 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 TAF12Q16514 161 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 TSTQ16762 297 aaKnown RBP11.69□□□□□ -0.54
CPSF7-218ENST00000537641 LRRC26Q2I0M4 334 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 EXOC3L2Q2M3D2 409 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 ZXDCQ2QGD7 858 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-218ENST00000537641 CPTPQ5TA50 214 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 PRAMEF9Q5VWM5 478 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 ACSM2BQ68CK6 577 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 ATCAYQ86WG3 371 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 TRIM69Q86WT6 500 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 SLC44A2Q8IWA5 706 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-218ENST00000537641 KLHDC8AQ8IYD2 350 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 SIMC1Q8NDZ2 872 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 ALG14Q96F25 216 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 WDFY2Q96P53 400 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 MGLLQ99685 303 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 TAPBPLQ9BX59 468 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 BRF2Q9HAW0 419 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 ASAH2Q9NR71 780 aa11.69□□□□□ -0.54
CPSF7-218ENST00000537641 GKN1Q9NS71 199 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms