RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 CYP1B1Q16678 543 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 LRRC66Q68CR7 880 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 TLDC1Q6P9B6 456 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 DRAXINQ8NBI3 349 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-209ENST00000537178 OR4C15Q8NGM1 316 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 ZNF285Q96NJ3 590 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 SEZ6LQ9BYH1 1024 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 MYNNQ9NPC7 610 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 ENAMQ9NRM1 1142 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 KLRF1Q9NZS2 232 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 GSKIPQ9P0R6 139 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 DLGAP1O14490 977 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 PROM1O43490 865 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 GSTM2P28161 218 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 SCNN1AP37088 669 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 MLLT3P42568 568 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-209ENST00000537178 NOVP48745 357 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 HSDL2Q6YN16 418 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 POGLUT1Q8NBL1 392 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 DENND1AQ8TEH3 1009 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 KCTD13Q8WZ19 329 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 KLK6Q92876 244 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 CCM2Q9BSQ5 444 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 TXLNGYQ9BZA5 131 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 UTS2RQ9UKP6 389 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 MAB21L2Q9Y586 359 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 A8MUA0 341 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 GPR89AB7ZAQ6 455 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 B8ZZF3 427 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 PDLIM1O00151 329 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 FLRT2O43155 660 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 TBX10O75333 385 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 OAS1P00973 400 aaKnown RBP10.31□□□□□ -0.76
CLIP1-209ENST00000537178 KLK1P06870 262 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 GPR89BP0CG08 455 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 ADGRF1Q5T601 910 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 XKRXQ6PP77 449 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 CEACAM20Q6UY09 585 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 GALNT12Q8IXK2 581 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 ZC3H3Q8IXZ2 948 aaKnown RBP10.31□□□□□ -0.76
CLIP1-209ENST00000537178 MFSD2AQ8NA29 543 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 OR5T2Q8NGG2 359 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 OR5AK3PQ8NH89 298 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 CD300LFQ8TDQ1 290 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 BARD1Q99728 777 aaKnown RBP10.31□□□□□ -0.76
CLIP1-209ENST00000537178 C11orf84Q9BUA3 381 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-209ENST00000537178 RIOK2Q9BVS4 552 aaKnown RBP10.31□□□□□ -0.76
CLIP1-209ENST00000537178 CD93Q9NPY3 652 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 MAFBQ9Y5Q3 323 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-209ENST00000537178 TMEM63AO94886 807 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 SIX3O95343 332 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-209ENST00000537178 KLK3P07288 261 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-209ENST00000537178 ELNP15502 786 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 CSKP41240 450 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 FXYD6P3P58550 94 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 SLC18A2Q05940 514 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 ABRAXAS2Q15018 415 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 SPATS1Q496A3 300 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 TREML2Q5T2D2 321 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 KCTD9Q7L273 389 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 TSTD1Q8NFU3 115 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 HSPA12BQ96MM6 686 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 FGFBP2Q9BYJ0 223 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 PTGES2Q9H7Z7 377 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 COL14A1Q05707 1796 aaKnown RBP10.31□□□□□ -0.76
CLIP1-209ENST00000537178 STRCQ7RTU9 1775 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 NDUFS4O43181 175 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 XPNPEP2O43895 674 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 DNAJB1P25685 340 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 FOXN2P32314 431 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 NRIP1P48552 1158 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 CLCNKAP51800 687 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 CRHR2Q13324 411 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 MOGQ16653 247 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 REM2Q8IYK8 340 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-209ENST00000537178 NIPA2Q8N8Q9 360 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 AQP11Q8NBQ7 271 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 SMARCD2Q92925 531 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 S100PBPQ96BU1 408 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 PYURFQ96I23 114 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 CDK15Q96Q40 435 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 ALPK1Q96QP1 1244 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 TPT1P8Q9HAU6 139 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 EXOSC1Q9Y3B2 195 aaKnown RBP10.31□□□□□ -0.76
CLIP1-209ENST00000537178 LRRN3E7EW58 273 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 M0R233 179 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 AXIN1O15169 862 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 GDF10P55107 478 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 CTBP2P56545 445 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 UBXN2BQ14CS0 331 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 BEND4Q6ZU67 534 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 SLC22A16Q86VW1 577 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 SLC35B2Q8TB61 432 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 CASTOR1Q8WTX7 329 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 ASB12Q8WXK4 309 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 OSTF1Q92882 214 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 C16orf58Q96GQ5 468 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 TMEM80Q96HE8 168 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 CMKLR1Q99788 373 aa10.31□□□□□ -0.76
CLIP1-209ENST00000537178 KATNBL1Q9H079 304 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms