RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 FBXL20Q96IG2 436 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 C12orf66Q96MD2 445 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 IL17FQ96PD4 163 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 INSM2Q96T92 566 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PKP4Q99569 1192 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DOK1Q99704 481 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 NPLQ9BXD5 320 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PCED1AQ9H1Q7 454 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 LRTM1Q9HBL6 345 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 IMP3Q9NV31 184 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SH3PXD2BA1X283 911 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DFNA5O60443 496 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ATP6V1G1O75348 118 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 GMNNO75496 209 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 STK16O75716 305 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SNAP29O95721 258 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ANXA5P08758 320 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PRPH2P23942 346 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MAP4P27816 1152 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 IMPA1P29218 277 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HOXA6P31267 233 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CSNK1EP49674 416 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HLCSP50747 726 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 RACK1P63244 317 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CHRNB3Q05901 458 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 RPA4Q13156 261 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 C1orf61Q13536 156 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DAG1Q14118 895 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MAPKAPK3Q16644 382 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 GGTA1PQ4G0N0 100 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 WDR5BQ86VZ2 330 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PARGQ86W56 976 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 OR2T12Q8NG77 320 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ZNF420Q8TAQ5 688 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PATE1Q8WXA2 126 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TFGQ92734 400 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 VPS50Q96JG6 964 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 FOPNLQ96NB1 174 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HBEGFQ99075 208 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 STOX2Q9P2F5 926 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ZNF490Q9ULM2 529 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TDRKHQ9Y2W6 561 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DNMT3AQ9Y6K1 912 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HEATR5BQ9P2D3 2071 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SERTM1A2A2V5 107 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TRIM64BA6NI03 449 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TNFRSF10CO14798 259 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SLC16A5O15375 505 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SCELO95171 688 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ALPLP05186 524 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PGRP06401 933 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HIST1H2AGP0C0S8 130 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HIST1H2ADP20671 130 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 NUDT1P36639 197 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 STT3AP46977 705 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DHPSP49366 369 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ENTPD1P49961 510 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CYP4F3Q08477 520 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PTCHD3Q3KNS1 767 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 LRIF1Q5T3J3 769 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ATG9BQ674R7 924 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 GPR180Q86V85 440 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MSRB3Q8IXL7 192 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PHACTR4Q8IZ21 702 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TCAIMQ8N3R3 496 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 LIX1Q8N485 282 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MCOLN3Q8TDD5 553 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 JPH3Q8WXH2 748 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ISOC1Q96CN7 298 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HIST1H2AHQ96KK5 128 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HIST1H2AJQ99878 128 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TUBA1CQ9BQE3 449 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 H2AFJQ9BTM1 129 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 LRRC61Q9BV99 259 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DUSP15Q9H1R2 295 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SLC32A1Q9H598 525 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PIF1Q9H611 641 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TMEM74BQ9NUR3 256 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 C1orf109Q9NX04 203 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MAN2B2Q9Y2E5 1009 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DGKBQ9Y6T7 804 aa12.43□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CCDC163A0A0D9SF12 145 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PABPN1LA6NDY0 278 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HRO43593 1189 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ERN1O75460 977 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CLDN9O95484 217 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 KRT6AP02538 564 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ALBP02768 609 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 KRT6BP04259 564 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 RETP07949 1114 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ACPPP15309 386 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 EPORP19235 508 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 KRT6CP48668 564 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CD97P48960 835 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 AP1S2P56377 157 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TSTA3Q13630 321 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PTGR1Q14914 329 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 FAM174BQ3ZCQ3 159 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PMS2CLQ68D20 193 aa12.42□□□□□ -0.42
CDK5RAP3-202ENST00000536708 LRRC70Q7Z2Q7 622 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms