RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 TGFB1P01137 390 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 OPN1SWP03999 348 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 ZNF8P17098 575 aaPredicted RBP12.64□□□□□ -0.39
LDLR-203ENST00000535915 DGKGP49619 791 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 PNLIPRP1P54315 467 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 ST8SIA6P61647 398 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 LSM3P62310 102 aaKnown RBP12.64□□□□□ -0.39
LDLR-203ENST00000535915 HBA1P69905 142 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 OCA2Q04671 838 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 LRRC74AQ0VAA2 488 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 COX20Q5RI15 118 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 ZNF852Q6ZMS4 543 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 COMMD6Q7Z4G1 85 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 PARP8Q8N3A8 854 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 ING5Q8WYH8 240 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 TRIM43Q96BQ3 446 aaPredicted RBP12.64□□□□□ -0.39
LDLR-203ENST00000535915 COX4I2Q96KJ9 171 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 BHLHE41Q9C0J9 482 aaPredicted RBP12.64□□□□□ -0.39
LDLR-203ENST00000535915 OR2AG1Q9H205 316 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 MARK1Q9P0L2 795 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 DOLKQ9UPQ8 538 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 PADI2Q9Y2J8 665 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 TESMINQ9Y4I5 508 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 PCDHGB3Q9Y5G1 929 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 ALPK3Q96L96 1907 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 K7ESM1 405 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 GABARAPO95166 117 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 ETFAP13804 333 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 TNFRSF1BP20333 461 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 KRT20P35900 424 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 OPRL1P41146 370 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 GSSP48637 474 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 MASP1P48740 699 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 METAP1P53582 386 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 SELENOWP63302 87 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 MC1RQ01726 317 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 MEF2AQ02078 507 aaPredicted RBP12.64□□□□□ -0.39
LDLR-203ENST00000535915 CLCA4Q14CN2 919 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 PROX2Q3B8N5 592 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 MFSD4BQ5TF39 518 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 ARMCX6Q7L4S7 300 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 TRMT11Q7Z4G4 463 aaKnown RBP12.64□□□□□ -0.39
LDLR-203ENST00000535915 SLCO6A1Q86UG4 719 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 NLRP8Q86W28 1048 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 CCDC71Q8IV32 467 aaPredicted RBP12.64□□□□□ -0.39
LDLR-203ENST00000535915 SVOPQ8N4V2 548 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 MRPL43Q8N983 215 aaKnown RBP12.64□□□□□ -0.39
LDLR-203ENST00000535915 VN1R2Q8NFZ6 395 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 HCAR2Q8TDS4 363 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 CXorf40BQ96DE9 158 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 DTD2Q96FN9 168 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 SLC35A5Q9BS91 424 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 CCNB1IP1Q9NPC3 277 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 ATAD3AQ9NVI7 634 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 ZNF451Q9Y4E5 1061 aa12.64□□□□□ -0.39
LDLR-203ENST00000535915 KIF26AQ9ULI4 1882 aaPredicted RBP12.63□□□□□ -0.39
LDLR-203ENST00000535915 PIPSLA2A3N6 862 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 M0R3G1 203 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 GCM2O75603 506 aaPredicted RBP12.63□□□□□ -0.39
LDLR-203ENST00000535915 C6orf47O95873 294 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 SRPRAP08240 638 aaKnown RBP12.63□□□□□ -0.39
LDLR-203ENST00000535915 C1GALT1C1LP0DN25 315 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 ALDH4A1P30038 563 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 ST13P50502 369 aaKnown RBP12.63□□□□□ -0.39
LDLR-203ENST00000535915 RELAQ04206 551 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 ATP1A4Q13733 1029 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 E2F2Q14209 437 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 HIST2H2ACQ16777 129 aaPredicted RBP12.63□□□□□ -0.39
LDLR-203ENST00000535915 PAGE2BQ5JRK9 111 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 HIST2H2AA3Q6FI13 130 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 GPR153Q6NV75 609 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 P2RY8Q86VZ1 359 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 TMCO5AQ8N6Q1 288 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 CIDECQ96AQ7 238 aaPredicted RBP12.63□□□□□ -0.39
LDLR-203ENST00000535915 OTUB2Q96DC9 234 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 EFCAB11Q9BUY7 163 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 OR51B5Q9H339 312 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 GPATCH2Q9NW75 528 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 SELENONQ9NZV5 590 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 ATP6V1HQ9UI12 483 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 TMEM229AB2RXF0 380 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 PSMD11O00231 422 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 TNFRSF11BO00300 401 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 SLC22A1O15245 554 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 PCDHGA12O60330 932 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 DPM1O60762 260 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 OCM2P0CE71 109 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 OCMP0CE72 109 aaPredicted RBP12.63□□□□□ -0.39
LDLR-203ENST00000535915 RXRGP48443 463 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 C2orf80Q0P641 193 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 ITGADQ13349 1161 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 DHCR24Q15392 516 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 LRRC26Q2I0M4 334 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 ADPRMQ3LIE5 342 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 SYT6Q5T7P8 510 aaPredicted RBP12.63□□□□□ -0.39
LDLR-203ENST00000535915 IER5LQ5T953 404 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 RAET1GQ6H3X3 334 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 DCDC5Q6ZRR9 648 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 AHSA2Q719I0 299 aa12.63□□□□□ -0.39
LDLR-203ENST00000535915 FBXO15Q8NCQ5 510 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms