RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 TRPV4Q9HBA0 871 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 TCF7L2Q9NQB0 619 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 OLFML3Q9NRN5 406 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 SPHK1Q9NYA1 384 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 MAD2L2Q9UI95 211 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 ADAM28Q9UKQ2 775 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 PLXNB3Q9ULL4 1909 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 TRIP11Q15643 1979 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 SF3B1O75533 1304 aaKnown RBP eCLIP3.1□□□□□ -1.912e-7■■■■□ 23.8
SNHG1-202ENST00000535689 NOTCH4Q99466 2003 aa3.1□□□□□ -1.91
SNHG1-202ENST00000535689 MYO18BQ8IUG5 2567 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 KALRNO60229 2985 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 COL6A6A6NMZ7 2263 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 VWA8A3KMH1 1905 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 ADAMTS9Q9P2N4 1935 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 MYH10P35580 1976 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 MYO18AQ92614 2054 aaKnown RBP3.09□□□□□ -1.91
SNHG1-202ENST00000535689 EDDM13A0A1B0GTR0 161 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 A0A1W2PPI3 338 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 OR2M5A3KFT3 312 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 MEIS2O14770 477 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 BUB3O43684 328 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 RNASEH1O60930 286 aaKnown RBP3.09□□□□□ -1.91
SNHG1-202ENST00000535689 DDHD2O94830 711 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 ERLIN2O94905 339 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 TRUB2O95900 331 aaKnown RBP3.09□□□□□ -1.91
SNHG1-202ENST00000535689 IGHV4-39P01824 125 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 QDPRP09417 244 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 MYOD1P15172 320 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 PSMA3P25788 255 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 HOXA11P31270 313 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-202ENST00000535689 SFNP31947 248 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 ASCL1P50553 236 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 CD81P60033 236 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 NANOS2P60321 138 aaKnown RBP3.09□□□□□ -1.91
SNHG1-202ENST00000535689 PHEXP78562 749 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 PPP2R2BQ00005 443 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 RELQ04864 619 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-202ENST00000535689 GFPT1Q06210 699 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-202ENST00000535689 PLD1Q13393 1074 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 KIR2DS3Q14952 304 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 ERMARDQ5T6L9 678 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 C9orf57Q5W0N0 161 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 TPGS2Q68CL5 300 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF280DQ6N043 979 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 FUT10Q6P4F1 479 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 NOTUMQ6P988 496 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 LINGO4Q6UY18 593 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 KCTD8Q6ZWB6 473 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 LPCAT2Q7L5N7 544 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 NFE4Q86UQ8 179 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 IQCHQ86VS3 1027 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 TMPRSS12Q86WS5 348 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 NUDT13Q86X67 352 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 TMEM219Q86XT9 240 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 C4orf19Q8IY42 314 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 SCML4Q8N228 414 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 FBXO39Q8N4B4 442 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF611Q8N823 705 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF713Q8N859 430 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-202ENST00000535689 TC2NQ8N9U0 490 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 OR5R1Q8NH85 324 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 ZNF461Q8TAF7 563 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 DUSP19Q8WTR2 217 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 SLC20A1Q8WUM9 679 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 CCDC51Q96ER9 411 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 LINGO1Q96FE5 620 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 GBP5Q96PP8 586 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 SERINC2Q96SA4 455 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 PCYT2Q99447 389 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 LMF2Q9BU23 707 aaKnown RBP3.09□□□□□ -1.91
SNHG1-202ENST00000535689 POLR3CQ9BUI4 534 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-202ENST00000535689 SPZ1Q9BXG8 430 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 CPVLQ9H3G5 476 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 OPA3Q9H6K4 179 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 GAREM1Q9H706 876 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 NOL11Q9H8H0 719 aaKnown RBP3.09□□□□□ -1.91
SNHG1-202ENST00000535689 ANKZF1Q9H8Y5 726 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 LY9Q9HBG7 655 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 MIOSQ9NXC5 875 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 WSB2Q9NYS7 404 aaPredicted RBP3.09□□□□□ -1.91
SNHG1-202ENST00000535689 SLC7A7Q9UM01 511 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 PIN4Q9Y237 131 aaKnown RBP3.09□□□□□ -1.91
SNHG1-202ENST00000535689 CCL27Q9Y4X3 112 aa3.09□□□□□ -1.91
SNHG1-202ENST00000535689 USP9XQ93008 2570 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-202ENST00000535689 LAMA5O15230 3695 aa3.08□□□□□ -1.92
SNHG1-202ENST00000535689 TSC2P49815 1807 aa3.08□□□□□ -1.92
SNHG1-202ENST00000535689 IGF2RP11717 2491 aa3.08□□□□□ -1.92
SNHG1-202ENST00000535689 A0A087WV48 116 aa3.08□□□□□ -1.92
SNHG1-202ENST00000535689 A0A1W2PN81 502 aa3.08□□□□□ -1.92
SNHG1-202ENST00000535689 A0A1W2PP11 408 aa3.08□□□□□ -1.92
SNHG1-202ENST00000535689 ARHGEF37A1IGU5 675 aa3.08□□□□□ -1.92
SNHG1-202ENST00000535689 MYBPHLA2RUH7 354 aa3.08□□□□□ -1.92
SNHG1-202ENST00000535689 ARL5CA6NH57 179 aa3.08□□□□□ -1.92
SNHG1-202ENST00000535689 SMTNL1A8MU46 457 aa3.08□□□□□ -1.92
SNHG1-202ENST00000535689 CDX4O14627 284 aaPredicted RBP3.08□□□□□ -1.92
SNHG1-202ENST00000535689 PRRG1O14668 218 aa3.08□□□□□ -1.92
SNHG1-202ENST00000535689 IFIT3O14879 490 aaKnown RBP3.08□□□□□ -1.92
SNHG1-202ENST00000535689 CCL16O15467 120 aa3.08□□□□□ -1.92
SNHG1-202ENST00000535689 AP5Z1O43299 807 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms