RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 PTNP21246 168 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 TNFSF8P32971 234 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 CNR2P34972 360 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 BDKRB1P46663 353 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 HNRNPFP52597 415 aaKnown RBP6.59□□□□□ -1.36
RAG1-203ENST00000534663 ATN1P54259 1190 aaPredicted RBP6.59□□□□□ -1.36
RAG1-203ENST00000534663 CXCR4P61073 352 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 GAB1Q13480 694 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 SCARB2Q14108 478 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 VEPH1Q14D04 833 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 IFI44LQ53G44 452 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 ATAD3CQ5T2N8 411 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 CXorf57Q6NSI4 855 aaKnown RBP6.59□□□□□ -1.36
RAG1-203ENST00000534663 ZNF544Q6NX49 715 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 PNCKQ6P2M8 343 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 CASP12Q6UXS9 341 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 RNF130Q86XS8 419 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 ENKURQ8TC29 256 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 CIDECQ96AQ7 238 aaPredicted RBP6.59□□□□□ -1.36
RAG1-203ENST00000534663 TMEM159Q96B96 161 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 C1GALT1C1Q96EU7 318 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 DOHHQ9BU89 302 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 HTATIP2Q9BUP3 242 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 SLC29A3Q9BZD2 475 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 MIEF1Q9NQG6 463 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 PCDH10Q9P2E7 1040 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 LHX3Q9UBR4 397 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 PSORS1C1Q9UIG5 152 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 TMCC3Q9ULS5 477 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 GABRQQ9UN88 632 aa6.59□□□□□ -1.36
RAG1-203ENST00000534663 CACNA1CQ13936 2221 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 MKI67P46013 3256 aaKnown RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 CCDC182A6NF36 153 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 MYL12BO14950 172 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 SYN3O14994 580 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 CDRT1O95170 752 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 PTTG1O95997 202 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 PSMA1P25786 263 aaKnown RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 CCND3P30281 292 aaPredicted RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 GGT2P36268 569 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 PTPN5P54829 565 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 ITGA1P56199 1179 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 RPS13P62277 151 aaKnown RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 OLR1P78380 273 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 C2orf80Q0P641 193 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 MTA1Q13330 715 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 DOC2AQ14183 400 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 TIMM50Q3ZCQ8 353 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 IQCCQ4KMZ1 466 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 AGAP6Q5VW22 663 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 SLC46A3Q7Z3Q1 461 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 SERPINA11Q86U17 422 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 CALHM3Q86XJ0 350 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 NPAS3Q8IXF0 933 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 LILRA3Q8N6C8 439 aaPredicted RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 ZNF366Q8N895 744 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 ASCC1Q8N9N2 400 aaKnown RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 TRIB2Q92519 343 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 RAB8BQ92930 207 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 USP7Q93009 1102 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 ZNF566Q969W8 418 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 TXNDC15Q96J42 360 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 HRASLS5Q96KN8 279 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 AGAP4Q96P64 663 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.58□□□□□ -1.36
RAG1-203ENST00000534663 SMG9Q9H0W8 520 aaKnown RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 ABCB8Q9NUT2 735 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 TVP23BQ9NYZ1 205 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 COMMD3Q9UBI1 195 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 TEKT2Q9UIF3 430 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 CFL2Q9Y281 166 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 PCDHB11Q9Y5F2 797 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 PCDHGB1Q9Y5G3 927 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 CCNB2O95067 398 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 PRKAR2AP13861 404 aaKnown RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 ATP6V1E1P36543 226 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 BMPR1AP36894 532 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 MAGEA11P43364 429 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 RECQLP46063 649 aaPredicted RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 SNRPD2P62316 118 aaKnown RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 NFE2L1Q14494 772 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 PTGES3Q15185 160 aaKnown RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 RGNQ15493 299 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 NDUFA5Q16718 116 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 CCSMST1Q4G0I0 132 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 LRIF1Q5T3J3 769 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 DEFB128Q7Z7B8 93 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 LSRQ86X29 649 aaPredicted RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 LAX1Q8IWV1 398 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 ZFP41Q8N8Y5 198 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 C17orf50Q8WW18 174 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 FATE1Q969F0 183 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 EFHD2Q96C19 240 aaPredicted RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 PDLIM5Q96HC4 596 aaKnown RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 FYTTD1Q96QD9 318 aaKnown RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 MOV10Q9HCE1 1003 aaKnown RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 CRNNQ9UBG3 495 aaPredicted RBP6.58□□□□□ -1.36
RAG1-203ENST00000534663 CLEC2DQ9UHP7 191 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 CLEC4EQ9ULY5 219 aa6.58□□□□□ -1.36
RAG1-203ENST00000534663 RUVBL1Q9Y265 456 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms