RNA–Protein interactions for RNA: ENST00000528556.5

RDX-205, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-205ENST00000528556 CLCA2Q9UQC9 943 aa8.05□□□□□ -1.12
RDX-205ENST00000528556 ARHGEF17Q96PE2 2063 aaPredicted RBP8.05□□□□□ -1.12
RDX-205ENST00000528556 IGHV5-10-1A0A0J9YXX1 117 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 EFCAB7A8K855 629 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 SDHDO14521 159 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 ZSCAN9O15535 394 aaPredicted RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 ERI3O43414 337 aaKnown RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 NRP2O60462 931 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 CTSVO60911 334 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 RSL1D1O76021 490 aaKnown RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 JUNP05412 331 aaKnown RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 SERPINA6P08185 405 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 ALOX15P16050 662 aaPredicted RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 ALAS2P22557 587 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 NOVA1P51513 510 aaKnown RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 RAB8AP61006 207 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 SIM1P81133 766 aaPredicted RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 RELAQ04206 551 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 GABPB1Q06547 395 aaPredicted RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 SQSTM1Q13501 440 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 TUBB3Q13509 450 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 TRA2AQ13595 282 aaKnown RBP eCLIP8.04□□□□□ -1.12
RDX-205ENST00000528556 CUL3Q13618 768 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 KCNAB1Q14722 419 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 GRM7Q14831 915 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 GPR19Q15760 415 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 FAM214AQ32MH5 1076 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 LSM12Q3MHD2 195 aaKnown RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 UGT3A2Q3SY77 523 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 SPIN4Q56A73 249 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 WASHC2DQ5SRD0 308 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 CCNYL2Q5T2Q4 361 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 IL23RQ5VWK5 629 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 FAM219BQ5XKK7 198 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 FRMPD2BQ6IN97 320 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 ADNP2Q6IQ32 1131 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 CGB2Q6NT52 195 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 FBXO42Q6P3S6 717 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 RNF44Q7L0R7 432 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 VASH1Q7L8A9 365 aaPredicted RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 TRIM46Q7Z4K8 759 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 PIGWQ7Z7B1 504 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 NUDT13Q86X67 352 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 ZFAND4Q86XD8 727 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 FAM9CQ8IZT9 166 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 C1orf52Q8N6N3 182 aaKnown RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 ANKRD53Q8N9V6 530 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 AGBL5Q8NDL9 886 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 ACTRT2Q8TDY3 377 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 MARK4Q96L34 752 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 C3orf30Q96M34 536 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 CATSPER2Q96P56 530 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 DEPDC7Q96QD5 511 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 OR52B2Q96RD2 323 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 CMKLR1Q99788 373 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 MACROD1Q9BQ69 325 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 C17orf62Q9BQA9 187 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 YIPF2Q9BWQ6 316 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 EBPLQ9BY08 206 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 MRPL1Q9BYD6 325 aaKnown RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 ROGDIQ9GZN7 287 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 TUBB1Q9H4B7 451 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 ZNF768Q9H5H4 540 aaKnown RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 ANKHQ9HCJ1 492 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 FAM60AQ9NP50 221 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 STARD5Q9NSY2 213 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 TXLNGQ9NUQ3 528 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 MRGBPQ9NV56 204 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 NOP53Q9NZM5 478 aaKnown RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 GIMAP2Q9UG22 337 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 RAPGEFL1Q9UHV5 662 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 RARRES3Q9UL19 164 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 RUVBL1Q9Y265 456 aaKnown RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 TMED5Q9Y3A6 229 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 POLR3HQ9Y535 204 aaPredicted RBP8.04□□□□□ -1.12
RDX-205ENST00000528556 PCDHGA1Q9Y5H4 931 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 SPACA6W5XKT8 324 aa8.04□□□□□ -1.12
RDX-205ENST00000528556 LOC105369274A0A096LPK9 316 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 A0A0G2JN53 185 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 LOC102723532A0A0G2JNH3 316 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 SPAARA0A1B0GVQ0 90 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 HYKKA2RU49 373 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 ERVH48-1M5A8F1 160 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 B3GALT2O43825 422 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 PCDH7O60245 1069 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 CBFA2T3O75081 653 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 GUCY1B2O75343 617 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 CSO75390 466 aaKnown RBP8.03□□□□□ -1.12
RDX-205ENST00000528556 MT-CO3P00414 261 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 KLK1P06870 262 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 ANXA4P09525 319 aaPredicted RBP8.03□□□□□ -1.12
RDX-205ENST00000528556 ANKRD34CP0C6C1 535 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 JMJD7P0C870 316 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 ZNF888P0CJ79 500 aaPredicted RBP8.03□□□□□ -1.12
RDX-205ENST00000528556 THRAP10827 490 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 PRPS2P11908 318 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 SNRPBP14678 240 aaKnown RBP8.03□□□□□ -1.12
RDX-205ENST00000528556 IDO1P14902 403 aa8.03□□□□□ -1.12
RDX-205ENST00000528556 NELFEP18615 380 aaKnown RBP8.03□□□□□ -1.12
RDX-205ENST00000528556 SDHBP21912 280 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms