RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 GALR3O60755 368 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 RDH16O75452 317 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 SUPT7LO94864 414 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 SIX3O95343 332 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 CAPN1P07384 714 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZGLP1P0C6A0 271 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 RNH1P13489 461 aaKnown RBP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 MTHFD2P13995 350 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 MMP11P24347 488 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 CRHR1P34998 444 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 PIK3CBP42338 1070 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 CASP2P42575 452 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 SSR2P43308 183 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 XCR1P46094 333 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 KCNC1P48547 511 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 EMP2P54851 167 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 RAB8AP61006 207 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 BTN3A2P78410 334 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 KLC1Q07866 573 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 PCDH1Q08174 1060 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 IFT88Q13099 833 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 KCNAB2Q13303 367 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 ATP1A4Q13733 1029 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 COL9A2Q14055 689 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 CPSF6Q16630 551 aaKnown RBP eCLIP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 TUBB8Q3ZCM7 444 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 ATP1A1-AS1Q5TC04 95 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZYG11AQ6WRX3 759 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 SHISA6Q6ZSJ9 500 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 COX15Q7KZN9 410 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 MILR1Q7Z6M3 343 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 HOMEZQ8IX15 550 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 SRRM1Q8IYB3 904 aaKnown RBP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 C4orf33Q8N1A6 199 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 ANKRD53Q8N9V6 530 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR2L5Q8NG80 312 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR51Q1Q8NH59 317 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR2W6PQ8NHA6 318 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 C9orf43Q8TAL5 461 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 UTP15Q8TED0 518 aaKnown RBP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 TM4SF19Q96DZ7 209 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 CMTM7Q96FZ5 175 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 APOPT1Q96IL0 206 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 KCNC2Q96PR1 638 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 OR1F2PQ96R84 312 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 MACROD1Q9BQ69 325 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 TGIF2Q9GZN2 237 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 SLC6A16Q9GZN6 736 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 REXO4Q9GZR2 422 aaKnown RBP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 ING2Q9H160 280 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 SPNS1Q9H2V7 528 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 RHBGQ9H310 441 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 ELOVL6Q9H5J4 265 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 NOL11Q9H8H0 719 aaKnown RBP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 SEMA4BQ9NPR2 832 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF358Q9NW07 568 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 NMRK1Q9NWW6 199 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 MKS1Q9NXB0 559 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 P4HTMQ9NXG6 502 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 TMEM216Q9P0N5 145 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 COPG2Q9UBF2 871 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 LGALS13Q9UHV8 139 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 TUBD1Q9UJT1 453 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 PCTPQ9UKL6 214 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 MKL2Q9ULH7 1088 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 SNX6Q9UNH7 406 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 KCNMB2Q9Y691 235 aa5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 TPRP12270 2363 aaKnown RBP5.12□□□□□ -1.59
HMGB1P40-201ENST00000525121 KIF26BQ2KJY2 2108 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 SDK2Q58EX2 2172 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 ACACAQ13085 2346 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 MAP1BP46821 2468 aaKnown RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 IGLV3-12A0A075B6K2 115 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 NSG1A0A0A6YYJ2 146 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 A0A1W2PPM1 405 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 ARHGAP10A1A4S6 786 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 LRIT2A6NDA9 550 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 ZNF860A6NHJ4 632 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 LRRC14BA6NHZ5 514 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 VSTM2BA6NLU5 285 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 IDSB3KWA1 339 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 H0YIV9 168 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 AGPSO00116 658 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 CLDN4O14493 209 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 FFAR3O14843 346 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 GPR42O15529 346 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 FOXS1O43638 330 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 KLF7O75840 302 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 WFS1O76024 890 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 BMP10O95393 424 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 MED26O95402 600 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 TGFB1P01137 390 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 KRT6AP02538 564 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 PROCP04070 461 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 KRT6BP04259 564 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 UMODP07911 640 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 FHP07954 510 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 RPS17P08708 135 aaKnown RBP5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 FAM87AP0C7U9 286 aa5.11□□□□□ -1.59
HMGB1P40-201ENST00000525121 C8orf89P0DMQ9 161 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms