RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 ANKDD1BA6NHY2 528 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 M0R082 166 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 PDHXO00330 501 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 WBP4O75554 376 aaKnown RBP8.71□□□□□ -1.01
CSMD1-212ENST00000523387 UGT2B17O75795 530 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 CLCN4P51793 760 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 PTCHD3Q3KNS1 767 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 DCST1Q5T197 706 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 LAIR2Q6ISS4 152 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 CBLL1Q75N03 491 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 ZNF598Q86UK7 904 aaKnown RBP8.71□□□□□ -1.01
CSMD1-212ENST00000523387 OR5AK3PQ8NH89 298 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 GTF3C2Q8WUA4 911 aaPredicted RBP8.71□□□□□ -1.01
CSMD1-212ENST00000523387 BOCQ9BWV1 1114 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 POLR2J3Q9H1A7 115 aaKnown RBP8.71□□□□□ -1.01
CSMD1-212ENST00000523387 SGK2Q9HBY8 427 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 SLC52A3Q9NQ40 469 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 PTGFRNQ9P2B2 879 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 DNMT3BQ9UBC3 853 aaKnown RBP8.71□□□□□ -1.01
CSMD1-212ENST00000523387 VPS29Q9UBQ0 182 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 CLCA2Q9UQC9 943 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 OARD1Q9Y530 152 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 KLK4Q9Y5K2 254 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 PBLDP30039 288 aaPredicted RBP8.71□□□□□ -1.01
CSMD1-212ENST00000523387 FEN1P39748 380 aaKnown RBP8.71□□□□□ -1.01
CSMD1-212ENST00000523387 ASMTP46597 345 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 SLC16A1P53985 500 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 ARHGEF6Q15052 776 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 SERPINA11Q86U17 422 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 PLCZ1Q86YW0 608 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 SPERTQ8NA61 448 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 POF1BQ8WVV4 589 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 NACC2Q96BF6 587 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 PPCDCQ96CD2 204 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 RIPOR3Q96MK2 946 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 PSKH2Q96QS6 385 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 EPYCQ99645 322 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 C11orf54Q9H0W9 315 aaPredicted RBP8.71□□□□□ -1.01
CSMD1-212ENST00000523387 PPIL3Q9H2H8 161 aaKnown RBP8.71□□□□□ -1.01
CSMD1-212ENST00000523387 C3orf14Q9HBI5 128 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 FBXL12Q9NXK8 326 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 STUB1Q9UNE7 303 aa8.71□□□□□ -1.01
CSMD1-212ENST00000523387 DNAJC25-GNG10A0A024R161 153 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 TRBC2A0A5B9 178 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 DSCR3O14972 297 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 ACSL4O60488 711 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 CLDN11O75508 207 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 OR7A10O76100 309 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 NUDT7P0C024 238 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 HOXC13P31276 330 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 CSTF1Q05048 431 aaKnown RBP8.71□□□□□ -1.02
CSMD1-212ENST00000523387 FAPQ12884 760 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 PTPRRQ15256 657 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 ZMAT1Q5H9K5 638 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 PLAG1Q6DJT9 500 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 HIST2H2AA3Q6FI13 130 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 BHLHB9Q6PI77 547 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 PHC2Q8IXK0 858 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 KIAA1958Q8N8K9 716 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 GEMIN6Q8WXD5 167 aaKnown RBP8.71□□□□□ -1.02
CSMD1-212ENST00000523387 OTUB1Q96FW1 271 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-212ENST00000523387 NLNQ9BYT8 704 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 CSNK1G1Q9HCP0 422 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 SLC6A13Q9NSD5 602 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 NKIRAS2Q9NYR9 191 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 FCF1Q9Y324 198 aaKnown RBP8.71□□□□□ -1.02
CSMD1-212ENST00000523387 PRKAB1Q9Y478 270 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 TLX2O43763 284 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-212ENST00000523387 NAT1P18440 290 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 XKP51811 444 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 DCDC1P59894 354 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 CHRNEQ04844 493 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 GPR19Q15760 415 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 MSRB3Q8IXL7 192 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 C1orf52Q8N6N3 182 aaKnown RBP8.71□□□□□ -1.02
CSMD1-212ENST00000523387 GDPD1Q8N9F7 314 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 ATP6V1C2Q8NEY4 427 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 OR4K1Q8NGD4 311 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 PAWRQ96IZ0 340 aaKnown RBP8.71□□□□□ -1.02
CSMD1-212ENST00000523387 SLC35A5Q9BS91 424 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 TSSK6Q9BXA6 273 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 MCUBQ9NWR8 336 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 ZNF282Q9UDV7 671 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-212ENST00000523387 MUTYHQ9UIF7 546 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 DNMT3LQ9UJW3 386 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 RIMKLBQ9ULI2 386 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 CLEC4AQ9UMR7 237 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 PCDHB11Q9Y5F2 797 aa8.71□□□□□ -1.02
CSMD1-212ENST00000523387 WASH4PA8MWX3 477 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 PDPK1O15530 556 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 TPST2O60704 377 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 CYP17A1P05093 508 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 LAMP1P11279 417 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 RGRP47804 291 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 PGFP49763 221 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 CRISP1P54107 249 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 TARDBPQ13148 414 aaKnown RBP eCLIP8.7□□□□□ -1.02
CSMD1-212ENST00000523387 NAE1Q13564 534 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 GBX1Q14549 363 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 HEPACAMQ14CZ8 416 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms