RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 GDF5P43026 501 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 CALCOCO2Q13137 446 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 ABRAXAS2Q15018 415 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 PAPD4Q6PIY7 484 aaKnown RBP19.49■□□□□ 0.71
SDCBP-209ENST00000522243 C17orf53Q8N3J3 647 aaPredicted RBP19.49■□□□□ 0.71
SDCBP-209ENST00000522243 SPATA4Q8NEY3 305 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 ANKRD7Q92527 254 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 TBC1D20Q96BZ9 403 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 OR1F2PQ96R84 312 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 SLX1AQ9BQ83 275 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 MCMBPQ9BTE3 642 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 KLHL31Q9H511 634 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 WHRNQ9P202 907 aa19.49■□□□□ 0.71
SDCBP-209ENST00000522243 ZGRF1Q86YA3 2104 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 PHGDHO43175 533 aaKnown RBP19.48■□□□□ 0.71
SDCBP-209ENST00000522243 CLDN1O95832 211 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 FHP07954 510 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 IL10P22301 178 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 CDKL1Q00532 357 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 HYAL2Q12891 473 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 CBLBQ13191 982 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 ABHD13Q7L211 337 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 ADAMTSL2Q86TH1 951 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 BEST3Q8N1M1 668 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 SUN3Q8TAQ9 357 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 RHBDF1Q96CC6 855 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 RNF32Q9H0A6 362 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 TEKT2Q9UIF3 430 aa19.48■□□□□ 0.71
SDCBP-209ENST00000522243 MAGEB17A8MXT2 336 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 LRRTM2O43300 516 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 OR4D2P58180 307 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 SKP1P63208 163 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 USP10Q14694 798 aaKnown RBP19.47■□□□□ 0.71
SDCBP-209ENST00000522243 FBXO48Q5FWF7 155 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 TOR1AIP1Q5JTV8 583 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 ZNF324BQ6AW86 544 aaPredicted RBP19.47■□□□□ 0.71
SDCBP-209ENST00000522243 MAATS1Q7Z4T9 603 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 CRLF3Q8IUI8 442 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 CDKL2Q92772 493 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 ZNF354BQ96LW1 612 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 LPAR4Q99677 370 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 SLC6A16Q9GZN6 736 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 AICDAQ9GZX7 198 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 RHBGQ9H310 441 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 POPDC3Q9HBV1 291 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 ANKRD10Q9NXR5 420 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 GRHL1Q9NZI5 618 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 TXNDC16Q9P2K2 825 aa19.47■□□□□ 0.71
SDCBP-209ENST00000522243 CROCCQ5TZA2 2017 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 C4orf51C9J302 202 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 MAN1A2O60476 641 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 PRAMEF2O60811 474 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 RASAL1O95294 804 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 WISP3O95389 354 aaPredicted RBP19.46■□□□□ 0.71
SDCBP-209ENST00000522243 CASQ1P31415 396 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 HNMTP50135 292 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 TDGF1P3P51864 188 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 KCNK10P57789 538 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 BTG2P78543 158 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 POU4F1Q01851 419 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 EXT1Q16394 746 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 ACER2Q5QJU3 275 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 H3F3CQ6NXT2 135 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 MAMDC2Q7Z304 686 aaPredicted RBP19.46■□□□□ 0.71
SDCBP-209ENST00000522243 CYP4X1Q8N118 509 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 TRPV3Q8NET8 790 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 M1APQ8TC57 530 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 NR4A3Q92570 626 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 ESAMQ96AP7 390 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 PTCHD1Q96NR3 888 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 NPAS2Q99743 824 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 DERL2Q9GZP9 239 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 MMP25Q9NPA2 562 aa19.46■□□□□ 0.71
SDCBP-209ENST00000522243 USP9YO00507 2555 aaPredicted RBP19.46■□□□□ 0.71
SDCBP-209ENST00000522243 SVILO95425 2214 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 A0A0G2JN53 185 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 TCRBV9S1A1TA0A576 114 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 URADA6NGE7 173 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 FAM227AF5H4B4 570 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 EIF3HO15372 352 aaKnown RBP eCLIP19.45■□□□□ 0.7
SDCBP-209ENST00000522243 H2AFYO75367 372 aaKnown RBP19.45■□□□□ 0.7
SDCBP-209ENST00000522243 CCDC166P0CW27 439 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 SMIM10L1P0DMW3 83 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 C1GALT1C1LP0DN25 315 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 JAK1P23458 1154 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 GMPRP36959 345 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 SLC6A12P48065 614 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 SLC26A5P58743 744 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 PMP22Q01453 160 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 TGFBIQ15582 683 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 INAQ16352 499 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 NIPAL1Q6NVV3 410 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 C3orf62Q6ZUJ4 267 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.45■□□□□ 0.7
SDCBP-209ENST00000522243 CREB3L4Q8TEY5 395 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 CCT6BQ92526 530 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 TSPAN17Q96FV3 270 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 SMIM10Q96HG1 83 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 RBBP8Q99708 897 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 CPNE1Q99829 537 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms