RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 NADKO95544 446 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 ATP5BP06576 529 aaKnown RBP2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 CD48P09326 243 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 PAEPP09466 180 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 RNF224P0DH78 156 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 PDHBP11177 359 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 GNB3P16520 340 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 MPZP25189 248 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 PTPN3P26045 913 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 NF2P35240 595 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 PTGER4P35408 488 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 WNT5AP41221 380 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 NR0B1P51843 470 aaKnown RBP2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 B3GALT5-AS1P59052 145 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 TIMM10P62072 90 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 GNB1P62873 340 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 PMP22Q01453 160 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 ACSM1Q08AH1 577 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 SLMAPQ14BN4 828 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 TNIP1Q15025 636 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 WHAMMP3Q1A5X7 153 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 UGT3A2Q3SY77 523 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 GTDC1Q4AE62 458 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 SPDYCQ5MJ68 293 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 ARHGEF16Q5VV41 709 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 ARHGAP11AQ6P4F7 1023 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 CYB5D1Q6P9G0 228 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 GSG1LQ6UXU4 331 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 STOX1Q6ZVD7 989 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 SLC16A9Q7RTY1 509 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 ARHGAP22Q7Z5H3 698 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 PIGZQ86VD9 579 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 CCDC50Q8IVM0 306 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 CD302Q8IX05 232 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 CDK20Q8IZL9 346 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 IQCKQ8N0W5 287 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 LSMEM2Q8N112 164 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 NDUFAF2Q8N183 169 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 RYBPQ8N488 228 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 THAP8Q8NA92 274 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 LINC00301Q8NCQ3 95 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 HPSE2Q8WWQ2 592 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 SUSD6Q92537 303 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 AZIN2Q96A70 460 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 LRR1Q96L50 414 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 PANX2Q96RD6 677 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 LITAFQ99732 161 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 CPNE1Q99829 537 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 AP1M1Q9BXS5 423 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 NAT10Q9H0A0 1025 aaKnown RBP2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 PFDN4Q9NQP4 134 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 INTS9Q9NV88 658 aaKnown RBP2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 INTS10Q9NVR2 710 aaKnown RBP2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 CHCHD3Q9NX63 227 aaKnown RBP2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 TBC1D7Q9P0N9 293 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 IFNKQ9P0W0 207 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 C5AR2Q9P296 337 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 SUN2Q9UH99 717 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF510Q9Y2H8 683 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 RIPK3Q9Y572 518 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 C4AP0C0L4 1744 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 C4BP0C0L5 1744 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 TRPM3Q9HCF6 1732 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 PARP4Q9UKK3 1724 aaKnown RBP2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 WNK3Q9BYP7 1800 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF142P52746 1687 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 COL18A1P39060 1754 aa2.95□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZMYM6O95789 1325 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 IGHV4-4A0A075B6R2 117 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 URADA6NGE7 173 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 ENO4A6NNW6 628 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 ERVV-1B6SEH8 477 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 GOLGA6L19H0YKK7 550 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 H3BQV1 296 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 H7C0S8 307 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 CCDC188H7C350 402 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 O00370 1275 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 ARPC2O15144 300 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 PPIP5K2O43314 1243 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 JAK2O60674 1132 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 RECQL5O94762 991 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 SLCO2B1O94956 709 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 NGFP01138 241 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 PENKP01210 267 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 APOA4P06727 396 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 CSN3P07498 182 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 OR52Z1P0C646 297 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 GHRP10912 638 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 CEACAM1P13688 526 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 IRF2P14316 349 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 MYL6BP14649 208 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 EPCAMP16422 314 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 FERP16591 822 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 CD22P20273 847 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 CDH3P22223 829 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 PSMA3P25788 255 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 CSTF2P33240 577 aaKnown RBP eCLIP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 MAGEA11P43364 429 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF41P51814 821 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 GNG11P61952 73 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms