RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 PSMA3P25788 255 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 CETN2P41208 172 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 SOX3P41225 446 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 DNA2P51530 1060 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 DLK1P80370 383 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 OPCMLQ14982 345 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 PTPN14Q15678 1187 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 GPR33Q49SQ1 333 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 KRBOX4Q5JUW0 171 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 C1orf141Q5JVX7 400 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 TMED8Q6PL24 325 aaPredicted RBP3.11□□□□□ -1.91
LINC01088-211ENST00000515597 ENPP7Q6UWV6 458 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 IL17RELQ6ZVW7 336 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 ERN2Q76MJ5 926 aaKnown RBP3.11□□□□□ -1.91
LINC01088-211ENST00000515597 ADCK2Q7Z695 626 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 ABHD12Q8N2K0 398 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 METTL21AQ8WXB1 218 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 TSACCQ96A04 125 aaPredicted RBP3.11□□□□□ -1.91
LINC01088-211ENST00000515597 PGM2Q96G03 612 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 MAP3K3Q99759 626 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 NAA11Q9BSU3 229 aaPredicted RBP3.11□□□□□ -1.91
LINC01088-211ENST00000515597 RPP25Q9BUL9 199 aaKnown RBP3.11□□□□□ -1.91
LINC01088-211ENST00000515597 GTPBP2Q9BX10 602 aaKnown RBP3.11□□□□□ -1.91
LINC01088-211ENST00000515597 SLC2A11Q9BYW1 496 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 OR10A4Q9H209 315 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 C5AR2Q9P296 337 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 NFKBIL1Q9UBC1 381 aaPredicted RBP3.11□□□□□ -1.91
LINC01088-211ENST00000515597 IGSF1Q8N6C5 1336 aa3.11□□□□□ -1.91
LINC01088-211ENST00000515597 MYO5CQ9NQX4 1742 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.1□□□□□ -1.91
LINC01088-211ENST00000515597 NLRP1Q9C000 1473 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 ARHGAP5Q13017 1502 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 A0A1W2PPK0 400 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 DKC1O60832 514 aaKnown RBP eCLIP3.1□□□□□ -1.91
LINC01088-211ENST00000515597 RECQL5O94762 991 aaPredicted RBP3.1□□□□□ -1.91
LINC01088-211ENST00000515597 GSRP00390 522 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 ATP1B1P05026 303 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 DUX4L4P0CJ87 422 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 ACAT1P24752 427 aaKnown RBP3.1□□□□□ -1.91
LINC01088-211ENST00000515597 OR3A2P47893 321 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 RAD23AP54725 363 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 CLDN15P56746 228 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 UBASH3AP57075 661 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 SRSF9Q13242 221 aaKnown RBP eCLIP3.1□□□□□ -1.91
LINC01088-211ENST00000515597 TRIM29Q14134 588 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 NONOQ15233 471 aaKnown RBP eCLIP3.1□□□□□ -1.91
LINC01088-211ENST00000515597 HYAL4Q2M3T9 481 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 CTR9Q6PD62 1173 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 PPP1R21Q6ZMI0 780 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 C11orf57Q6ZUT1 292 aaPredicted RBP3.1□□□□□ -1.91
LINC01088-211ENST00000515597 FCRLAQ7L513 359 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 HPS6Q86YV9 775 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 FAM89BQ8N5H3 189 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 IQUBQ8NA54 791 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 C9orf43Q8TAL5 461 aaPredicted RBP3.1□□□□□ -1.91
LINC01088-211ENST00000515597 CNRIP1Q96F85 164 aaPredicted RBP3.1□□□□□ -1.91
LINC01088-211ENST00000515597 ATXN7L3BQ96GX2 97 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 BAG1Q99933 345 aaPredicted RBP3.1□□□□□ -1.91
LINC01088-211ENST00000515597 PARLQ9H300 379 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 SNX25Q9H3E2 840 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 MTHFD2LQ9H903 347 aaPredicted RBP3.1□□□□□ -1.91
LINC01088-211ENST00000515597 DNAJC4Q9NNZ3 241 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 POLLQ9UGP5 575 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 ZNF510Q9Y2H8 683 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 TNS2Q63HR2 1409 aa3.1□□□□□ -1.91
LINC01088-211ENST00000515597 PRXQ9BXM0 1461 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 ARHGAP35Q9NRY4 1499 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 TSPY2A6NKD2 308 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 CCDC188H7C350 402 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 TIMM44O43615 452 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 ATP6AP2O75787 350 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 APOA4P06727 396 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 FDPSP14324 419 aaKnown RBP3.09□□□□□ -1.91
LINC01088-211ENST00000515597 EPORP19235 508 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 IL4RP24394 825 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 CD27P26842 260 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 PIK3R1P27986 724 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 PDHA2P29803 388 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 CACNG1Q06432 222 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 MZT1Q08AG7 82 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 RASGEF1BQ0VAM2 473 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 TRA2AQ13595 282 aaKnown RBP eCLIP3.09□□□□□ -1.91
LINC01088-211ENST00000515597 TMEM132DQ14C87 1099 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 RBBP7Q16576 425 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 HIGD2BQ4VC39 106 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 FGD3Q5JSP0 725 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 ZER1Q7Z7L7 766 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 AMIGO1Q86WK6 493 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 KLHDC1Q8N7A1 406 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.09□□□□□ -1.91
LINC01088-211ENST00000515597 KIF18AQ8NI77 898 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 ATP8B4Q8TF62 1192 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 CHPT1Q8WUD6 406 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 SEPT1Q8WYJ6 367 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 ERP27Q96DN0 273 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 PDLIM5Q96HC4 596 aaKnown RBP3.09□□□□□ -1.91
LINC01088-211ENST00000515597 C2orf48Q96LS8 159 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 RAB3IPQ96QF0 476 aaPredicted RBP3.09□□□□□ -1.91
LINC01088-211ENST00000515597 SERINC2Q96SA4 455 aa3.09□□□□□ -1.91
LINC01088-211ENST00000515597 CDCA3Q99618 268 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms