RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 S100BP04271 92 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-215ENST00000515516 GSTA2P09210 222 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 C1GALT1C1LP0DN25 315 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 NCF1P14598 390 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-215ENST00000515516 STMN1P16949 149 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 SSTR1P30872 391 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 HPDP32754 393 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-215ENST00000515516 EFNA3P52797 238 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 RAB8AP61006 207 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 STXBP1P61764 594 aaKnown RBP12.87□□□□□ -0.35
TCOF1-215ENST00000515516 OLR1P78380 273 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 RHAGQ02094 409 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 CAV1Q03135 178 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 C2orf54Q08AI8 447 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 MEP1AQ16819 746 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 PAPD4Q6PIY7 484 aaKnown RBP12.87□□□□□ -0.35
TCOF1-215ENST00000515516 GPSM1Q86YR5 675 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 CTAGE3PQ8IX95 158 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 KRT78Q8N1N4 520 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 SLC5A8Q8N695 610 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 ARMC2Q8NEN0 867 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 UTP15Q8TED0 518 aaKnown RBP12.87□□□□□ -0.35
TCOF1-215ENST00000515516 ANKRD49Q8WVL7 239 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 CCT6BQ92526 530 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 FAR2Q96K12 515 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 PRM3Q9NNZ6 103 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 MMP25Q9NPA2 562 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 WWOXQ9NZC7 414 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 MTO1Q9Y2Z2 717 aaKnown RBP12.87□□□□□ -0.35
TCOF1-215ENST00000515516 LRRK2Q5S007 2527 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 CLGNO14967 610 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 PRMT3O60678 531 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 PIAS1O75925 651 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 LDLRP01130 860 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 SERPINA6P08185 405 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 CCDC166P0CW27 439 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 RNH1P13489 461 aaKnown RBP12.86□□□□□ -0.35
TCOF1-215ENST00000515516 SPRP35270 261 aaPredicted RBP12.86□□□□□ -0.35
TCOF1-215ENST00000515516 GP5P40197 560 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 GDF5P43026 501 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 PLTPP55058 493 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 ATP6V0D1P61421 351 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 TGFBIQ15582 683 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 TOR1AIP1Q5JTV8 583 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 ACER2Q5QJU3 275 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 CYS1Q717R9 158 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 MAMDC2Q7Z304 686 aaPredicted RBP12.86□□□□□ -0.35
TCOF1-215ENST00000515516 CCDC25Q86WR0 208 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 CYP4X1Q8N118 509 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 DNAJB8Q8NHS0 232 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 TSLPQ969D9 159 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 RHBDF1Q96CC6 855 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 PTCHD1Q96NR3 888 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 UTP23Q9BRU9 249 aaKnown RBP12.86□□□□□ -0.35
TCOF1-215ENST00000515516 SLC6A16Q9GZN6 736 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 SPNS1Q9H2V7 528 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 RHBGQ9H310 441 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 CAB39LQ9H9S4 337 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 SMYD2Q9NRG4 433 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 LANCL2Q9NS86 450 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 GPRC5BQ9NZH0 403 aa12.86□□□□□ -0.35
TCOF1-215ENST00000515516 PTPN13Q12923 2485 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 CCDC88CQ9P219 2028 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 A0A088AWK7 358 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 A0A1B0GUH1 482 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 TCRBV9S1A1TA0A576 114 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 WIPF3A6NGB9 483 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 CXorf49A8MYA2 514 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-215ENST00000515516 E2F3O00716 465 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 FANCGO15287 622 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 LRRTM2O43300 516 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 B3GALT4O96024 378 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 RNF224P0DH78 156 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 ZNF10P21506 573 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-215ENST00000515516 GSTM2P28161 218 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 ETF1P62495 437 aaKnown RBP12.85□□□□□ -0.35
TCOF1-215ENST00000515516 BTN3A2P78410 334 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 SLBPQ14493 270 aaKnown RBP eCLIP12.85□□□□□ -0.35
TCOF1-215ENST00000515516 ZNF766Q5HY98 468 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 CDKL4Q5MAI5 379 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 GRTP1Q5TC63 336 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 FCRLBQ6BAA4 426 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 SULT1C3Q6IMI6 304 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 H3F3CQ6NXT2 135 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 GFRALQ6UXV0 394 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 TMIGD1Q6UXZ0 262 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 SYT10Q6XYQ8 523 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 RAPH1Q70E73 1250 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 SHISA5Q8N114 240 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 BEST3Q8N1M1 668 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 SPATA6LQ8N4H0 392 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 HORMAD2Q8N7B1 307 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 SNX31Q8N9S9 440 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 ANKRD53Q8N9V6 530 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 NR4A3Q92570 626 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 GPR22Q99680 433 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 RBBP8Q99708 897 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 SLX1AQ9BQ83 275 aa12.85□□□□□ -0.35
TCOF1-215ENST00000515516 UNKQ9C0B0 810 aaKnown RBP12.85□□□□□ -0.35
TCOF1-215ENST00000515516 PITHD1Q9GZP4 211 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms