RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 RAD51Q06609 339 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 IL10RBQ08334 325 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 FAPQ12884 760 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 SLC14A1Q13336 389 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 PON2Q15165 354 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 WSCD2Q2TBF2 565 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 USP39Q53GS9 565 aaKnown RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 CTSL3PQ5NE16 218 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 FAM46CQ5VWP2 391 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 ZER1Q7Z7L7 766 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 PTOV1Q86YD1 416 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 CELF2-AS1Q8N7Q2 184 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 PSD4Q8NDX1 1056 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 IPMKQ8NFU5 416 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 MAGEE2Q8TD90 523 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 NDRG1Q92597 394 aaKnown RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 SDCCAG3Q96C92 435 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 LOXL4Q96JB6 756 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 ZNF649Q9BS31 505 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 SRRQ9GZT4 340 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 TLK1Q9UKI8 766 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 CA14Q9ULX7 337 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 AAR2Q9Y312 384 aaKnown RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 PCDHGA2Q9Y5H1 932 aa7.14□□□□□ -1.27
CLIP1-205ENST00000514271 CFAP20Q9Y6A4 193 aaKnown RBP7.14□□□□□ -1.27
CLIP1-205ENST00000514271 CKAP5Q14008 2032 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CCDC154A6NI56 674 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 FAM170BA6NMN3 283 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 NRG2O14511 850 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 KDELR3O43731 214 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 ADH1BP00325 375 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 DDX5P17844 614 aaKnown RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 LBPP18428 481 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CR2P20023 1033 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 MSH3P20585 1137 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 OGNP20774 298 aaKnown RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 IL10P22301 178 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 EPHA2P29317 976 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 SLC6A4P31645 630 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 TIE1P35590 1138 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 GLRBP48167 497 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 TMED10P49755 219 aaKnown RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 POLR2JP52435 117 aaKnown RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 HMGA2P52926 109 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 ATXN3P54252 364 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 RAD23AP54725 363 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 WNT3P56703 355 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 OCA2Q04671 838 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 USP10Q14694 798 aaKnown RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CYP51A1Q16850 503 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 SLC25A30Q5SVS4 291 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 MSANTD1Q6ZTZ1 278 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CAMKMTQ7Z624 323 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 TMEM25Q86YD3 366 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 FAM26EQ8N5C1 309 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 LSMEM1Q8N8F7 131 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 SLC38A4Q969I6 547 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 VPS33AQ96AX1 596 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 GPR137Q96N19 417 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 SMG9Q9H0W8 520 aaKnown RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 LMAN1LQ9HAT1 526 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 ZNF226Q9NYT6 803 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 SH3BP4Q9P0V3 963 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 LEF1Q9UJU2 399 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 VPS9D1Q9Y2B5 631 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 C1orf226A1L170 272 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 VSTM5A8MXK1 200 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 J3KRW8 73 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 AP3D1O14617 1153 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CFLARO15519 480 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 LAMTOR5O43504 91 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 KLHL18O94889 574 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 GUCA1CO95843 209 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 MT-CYBP00156 380 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 IGLV3-19P01714 112 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 C1QCP02747 245 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 ALBP02768 609 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 UROSP10746 265 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 PBLDP30039 288 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CLCN7P51798 805 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 VBP1P61758 197 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 C21orf62-AS1Q17RA5 79 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 TRIM16LQ309B1 348 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 SCYL2Q6P3W7 929 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 LYPD8Q6UX82 237 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 USP30Q70CQ3 517 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 SLC51BQ86UW2 128 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 PIM3Q86V86 326 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 FAM131BQ86XD5 332 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 CCDC116Q8IYX3 515 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 DNAJB8Q8NHS0 232 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 PSMA8Q8TAA3 256 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 BLOC1S5Q8TDH9 187 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 RPP25Q9BUL9 199 aaKnown RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 LINC00597Q9H2U6 94 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 ZBTB20Q9HC78 741 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-205ENST00000514271 INVSQ9Y283 1065 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 HCN4Q9Y3Q4 1203 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 TBC1D3BA6NDS4 549 aa7.13□□□□□ -1.27
CLIP1-205ENST00000514271 C1QTNF3-AMACRE9PGA6 284 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms