RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 PRDM9Q9NQV7 894 aa9.27□□□□□ -0.92
POLR2J3-215ENST00000511313 METTL18O95568 372 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 HEXAP06865 529 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 CDH1P12830 882 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 MSX1P28360 303 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 HTR3AP46098 478 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 HSPA7P48741 367 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 OR1D5P58170 312 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 GPAT3Q53EU6 434 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 C5orf46Q6UWT4 87 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 YTHDF3Q7Z739 585 aaKnown RBP9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 TSPAN33Q86UF1 283 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 TMEM151BQ8IW70 566 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 METTL25Q8N6Q8 603 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 SLC35G5Q96KT7 338 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 ACAD8Q9UKU7 415 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 CCDC154A6NI56 674 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 BHMG1C9JSJ3 638 aaPredicted RBP9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 PCDH7O60245 1069 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 B4GALT2O60909 372 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 NIPSNAP2O75323 286 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 ALOX12BO75342 701 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 RSL1D1O76021 490 aaKnown RBP9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 PORP16435 677 aaPredicted RBP9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 SSTR1P30872 391 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 PLCXD2Q0VAA5 305 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 CCDC142Q17RM4 750 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 CYP27C1Q4G0S4 372 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 ARL9Q6T311 187 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 GCNT7Q6ZNI0 430 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 TMEM135Q86UB9 458 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 TREML1Q86YW5 311 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 PRSS58Q8IYP2 241 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 CENPLQ8N0S6 344 aaPredicted RBP9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 KCTD4Q8WVF5 259 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 SLC39A3Q9BRY0 314 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 ALKBH4Q9NXW9 302 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 AJAP1Q9UKB5 411 aaPredicted RBP9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 TRIP12Q14669 1992 aaPredicted RBP9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 PLK4O00444 970 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 TRIM3O75382 744 aaPredicted RBP9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 MTX2O75431 263 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 TRAPPC6AO75865 159 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 STK17BO94768 372 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 PRDX3P30048 256 aaKnown RBP9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 KCNJ5P48544 419 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 TRPC1P48995 793 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 MAGOHP61326 146 aaKnown RBP9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 MC2RQ01718 297 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 TLR1Q15399 786 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 INAQ16352 499 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 ATG9BQ674R7 924 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 TIFABQ6ZNK6 161 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 ARHGAP36Q6ZRI8 547 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 BCORP1Q8N888 145 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 MUC13Q9H3R2 512 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 RIBC2Q9H4K1 309 aa9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 NOP16Q9Y3C1 178 aaKnown RBP9.27□□□□□ -0.93
POLR2J3-215ENST00000511313 SPAARA0A1B0GVQ0 90 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 A0A1W2PQF6 199 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 KLHL18O94889 574 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 IL6P05231 212 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 PGCP20142 388 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 AOAHP28039 575 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 MARCKSL1P49006 195 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 NFYCQ13952 458 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 TYSND1Q2T9J0 566 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 DEFB109BQ30KR1 87 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 GRHL2Q6ISB3 625 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 OGFOD3Q6PK18 319 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 PAQR3Q6TCH7 311 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 SPRED1Q7Z699 444 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 LRRC34Q8IZ02 419 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 LINC00471Q8N535 108 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 NPWQ8N729 165 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 POMGNT2Q8NAT1 580 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 PIK3C3Q8NEB9 887 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 PMM1Q92871 262 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 INSM2Q96T92 566 aaPredicted RBP9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 POMT2Q9UKY4 750 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 OR51B4Q9Y5P0 310 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 PMS2P1A4D2B8 440 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 ZNF185O15231 689 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 AK4P27144 223 aaPredicted RBP9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 TBPL1P62380 186 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 ALDH6A1Q02252 535 aaKnown RBP9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 PTCHD3Q3KNS1 767 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 CRB2Q5IJ48 1285 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 MSANTD1Q6ZTZ1 278 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 RSPRY1Q96DX4 576 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 FAM111AQ96PZ2 611 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 MKL2Q9ULH7 1088 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 PCDHGA3Q9Y5H0 932 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 SLC22A7Q9Y694 548 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 FARS2O95363 451 aaKnown RBP9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 IMPDH1P20839 514 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 ATP6V1E1P36543 226 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 PLA2G16P53816 162 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 GPR18Q14330 331 aa9.26□□□□□ -0.93
POLR2J3-215ENST00000511313 VWA5B1Q5TIE3 1220 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms