RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 DDHD1Q8NEL9 900 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 OR5T2Q8NGG2 359 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 OR4D10Q8NGI6 311 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 MRGPRDQ8TDS7 321 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 CHURC1Q8WUH1 139 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 ARHGAP45Q92619 1136 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 CASP10Q92851 521 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 SNX21Q969T3 373 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 NXPE2Q96DL1 559 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 FBXO17Q96EF6 278 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 PRAC1Q96KF2 57 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 LRR1Q96L50 414 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 DPEP2Q9H4A9 486 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 ZDHHC6Q9H6R6 413 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 PRMT8Q9NR22 394 aaPredicted RBP4.88□□□□□ -1.63
CHD1-206ENST00000511067 INTS10Q9NVR2 710 aaKnown RBP4.88□□□□□ -1.63
CHD1-206ENST00000511067 APPL1Q9UKG1 709 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 NCKAP1Q9Y2A7 1128 aa4.88□□□□□ -1.63
CHD1-206ENST00000511067 AMBPP02760 352 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 PAX9P55771 341 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 CSNK2BP67870 215 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 TRA2AQ13595 282 aaKnown RBP eCLIP4.87□□□□□ -1.63
CHD1-206ENST00000511067 CDH18Q13634 790 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 TMEM132DQ14C87 1099 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 MAPK11Q15759 364 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 ASPGQ86U10 573 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 TMEM126BQ8IUX1 230 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 TEX26Q8N6G2 289 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 RTL3Q8N8U3 475 aaKnown RBP4.87□□□□□ -1.63
CHD1-206ENST00000511067 MAPK15Q8TD08 544 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 SMAP2Q8WU79 429 aaPredicted RBP4.87□□□□□ -1.63
CHD1-206ENST00000511067 GGHQ92820 318 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 AZIN2Q96A70 460 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 GMPPAQ96IJ6 420 aaPredicted RBP4.87□□□□□ -1.63
CHD1-206ENST00000511067 NECTIN4Q96NY8 510 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 GAL3ST4Q96RP7 486 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 IL12RB2Q99665 862 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 LRRC2Q9BYS8 371 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.87□□□□□ -1.63
CHD1-206ENST00000511067 CYP39A1Q9NYL5 469 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 TMOD3Q9NYL9 352 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 POLKQ9UBT6 870 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 SATB2Q9UPW6 733 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 FOXA2Q9Y261 457 aaPredicted RBP4.87□□□□□ -1.63
CHD1-206ENST00000511067 ZNF510Q9Y2H8 683 aa4.87□□□□□ -1.63
CHD1-206ENST00000511067 A0A087WZ39 114 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 TMEM129A0AVI4 362 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 C15orf61A6NNL5 157 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 ZBTB14O43829 449 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 MT-ND2P03891 347 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 MT-ND3P03897 115 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 HLA-FP30511 346 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 ATP6V1E1P36543 226 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 CBX3Q13185 183 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 HNRNPDQ14103 355 aaKnown RBP4.86□□□□□ -1.63
CHD1-206ENST00000511067 DUSP5Q16690 384 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 SGSM1Q2NKQ1 1148 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 KLHL22Q53GT1 634 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 ATP1A1-AS1Q5TC04 95 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 TCEAL6Q6IPX3 200 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 SLC27A4Q6P1M0 643 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 CD164L2Q6UWJ8 174 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 TRMT11Q7Z4G4 463 aaKnown RBP4.86□□□□□ -1.63
CHD1-206ENST00000511067 HOGA1Q86XE5 327 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 LAX1Q8IWV1 398 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 SFRP1Q8N474 314 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 TCEANCQ8N8B7 351 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 SMYD1Q8NB12 490 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 OR6S1Q8NH40 331 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 ST7LQ8TDW4 575 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 CCDC47Q96A33 483 aaKnown RBP4.86□□□□□ -1.63
CHD1-206ENST00000511067 RFT1Q96AA3 541 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 ULK4Q96C45 1275 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 MAGED4Q96JG8 741 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 NEDD4LQ96PU5 975 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 ATAD3AQ9NVI7 634 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 HMG20BQ9P0W2 317 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 TMED7Q9Y3B3 224 aa4.86□□□□□ -1.63
CHD1-206ENST00000511067 MEIOCA2RUB1 952 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 GTPBP10A4D1E9 387 aaKnown RBP4.85□□□□□ -1.63
CHD1-206ENST00000511067 C5orf51A6NDU8 294 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 SERINC4A6NH21 518 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 PRDM1O75626 825 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 CEACAM4O75871 244 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 HMOX1P09601 288 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 P4HA1P13674 534 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 CPA3P15088 417 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 MYOGP15173 224 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 SLC1A3P43003 542 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 NT5C2P49902 561 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 NR0B1P51843 470 aaKnown RBP4.85□□□□□ -1.63
CHD1-206ENST00000511067 UCP2P55851 309 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 SNRPD1P62314 119 aaKnown RBP4.85□□□□□ -1.63
CHD1-206ENST00000511067 LCP2Q13094 533 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 FAM106AQ4KMX7 169 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 ADAMTSL4-AS1Q5T5F5 129 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 ZNF776Q68DI1 518 aaPredicted RBP4.85□□□□□ -1.63
CHD1-206ENST00000511067 ETFRF1Q6IPR1 90 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 USP43Q70EL4 1123 aa4.85□□□□□ -1.63
CHD1-206ENST00000511067 ZNF410Q86VK4 478 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms