RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 HEXBP07686 556 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 ACPPP15309 386 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 EPORP19235 508 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 EEF1DP29692 281 aaKnown RBP15.8■□□□□ 0.12
SNCA-209ENST00000506244 XCR1P46094 333 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 PHEXP78562 749 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 MAT1AQ00266 395 aaKnown RBP15.8■□□□□ 0.12
SNCA-209ENST00000506244 IFFO1Q0D2I5 559 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 GTF2H2Q13888 395 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 TUBB8Q3ZCM7 444 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 DEFB134Q4QY38 66 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 VWA2Q5GFL6 755 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 TOR1AIP1Q5JTV8 583 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 LIPJQ5W064 366 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 GRHL2Q6ISB3 625 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 GTF2H2CQ6P1K8 395 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 MED27Q6P2C8 311 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 PRSS41Q7RTY9 318 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 MYLK4Q86YV6 388 aaPredicted RBP15.8■□□□□ 0.12
SNCA-209ENST00000506244 PRSS58Q8IYP2 241 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 OR51Q1Q8NH59 317 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 UTP15Q8TED0 518 aaKnown RBP15.8■□□□□ 0.12
SNCA-209ENST00000506244 CAVIN3Q969G5 261 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 REPS1Q96D71 796 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 PHF21BQ96EK2 531 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 FAR2Q96K12 515 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 RHBGQ9H310 441 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 ACTR8Q9H981 624 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 HCN3Q9P1Z3 774 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 PCDHGA9Q9Y5G4 932 aaKnown RBP15.8■□□□□ 0.12
SNCA-209ENST00000506244 NUP210LQ5VU65 1888 aa15.8■□□□□ 0.12
SNCA-209ENST00000506244 SMIM23A6NLE4 172 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 GLRA3O75311 464 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 WFS1O76024 890 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 JAK1P23458 1154 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 SLCO1A2P46721 670 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 EMP2P54851 167 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 FOXL2P58012 376 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 CHAF1BQ13112 559 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 SYT16Q17RD7 645 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 ERCC6LQ2NKX8 1250 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 LACTB2Q53H82 288 aaPredicted RBP15.79■□□□□ 0.12
SNCA-209ENST00000506244 DCAF10Q5QP82 559 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 MFSD4BQ5TF39 518 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 IRAK1BP1Q5VVH5 260 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 TCTN3Q6NUS6 607 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 TRIM40Q6P9F5 258 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 GOLGA7Q7Z5G4 137 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 PDSS2Q86YH6 399 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 LAS2Q8IYD9 372 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 SRFBP1Q8NEF9 429 aaKnown RBP15.79■□□□□ 0.12
SNCA-209ENST00000506244 MZB1Q8WU39 189 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 METTL21AQ8WXB1 218 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 MAGEB10Q96LZ2 347 aaPredicted RBP15.79■□□□□ 0.12
SNCA-209ENST00000506244 IPPKQ9H8X2 491 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 C19orf25Q9UFG5 118 aaPredicted RBP15.79■□□□□ 0.12
SNCA-209ENST00000506244 DCDC2Q9UHG0 476 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 HS3ST3B1Q9Y662 390 aa15.79■□□□□ 0.12
SNCA-209ENST00000506244 LRIT2A6NDA9 550 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 ZNF860A6NHJ4 632 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 E2F3O00716 465 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 SOCS6O14544 535 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 FFAR3O14843 346 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 GPR42O15529 346 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 ERI3O43414 337 aaKnown RBP15.78■□□□□ 0.12
SNCA-209ENST00000506244 PRAMEF4O60810 478 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 DNAJB5O75953 348 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 SIX3O95343 332 aaPredicted RBP15.78■□□□□ 0.12
SNCA-209ENST00000506244 BMP10O95393 424 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 PYGBP11216 843 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 CD22P20273 847 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 ARL1P40616 181 aaPredicted RBP15.78■□□□□ 0.12
SNCA-209ENST00000506244 PGDP52209 483 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 HYAL2Q12891 473 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 AIMP2Q13155 320 aaKnown RBP15.78■□□□□ 0.12
SNCA-209ENST00000506244 MINDY4Q4G0A6 757 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 PRAMEF9Q5VWM5 478 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 SLC22A9Q8IVM8 553 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 OR2L5Q8NG80 312 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 ADAMTS18Q8TE60 1221 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 EPS8L3Q8TE67 593 aaKnown RBP15.78■□□□□ 0.12
SNCA-209ENST00000506244 ATP6V1E2Q96A05 226 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 ABHD17AQ96GS6 310 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 CENPKQ9BS16 269 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 SLC25A23Q9BV35 468 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 TRIM55Q9BYV6 548 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 SEMA4CQ9C0C4 833 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 ROGDIQ9GZN7 287 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 REXO4Q9GZR2 422 aaKnown RBP15.78■□□□□ 0.12
SNCA-209ENST00000506244 COPS7BQ9H9Q2 264 aaPredicted RBP15.78■□□□□ 0.12
SNCA-209ENST00000506244 ATP13A2Q9NQ11 1180 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 FBXL4Q9UKA2 621 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 PCTPQ9UKL6 214 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 MKL2Q9ULH7 1088 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 PCDHGB7Q9Y5F8 929 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 PCDHGA11Q9Y5H2 935 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 ATRXP46100 2492 aa15.78■□□□□ 0.12
SNCA-209ENST00000506244 SMG1Q96Q15 3661 aaKnown RBP15.78■□□□□ 0.12
SNCA-209ENST00000506244 A8MT66 165 aa15.77■□□□□ 0.12
SNCA-209ENST00000506244 GOLGA8RI6L899 631 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms