RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 UTP15Q8TED0 518 aaKnown RBP15.09■□□□□ 0.01
LIME1-209ENST00000494776 CREB3L4Q8TEY5 395 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 UBE2E3Q969T4 207 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 WDR34Q96EX3 536 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 SEC16BQ96JE7 1060 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 FAR2Q96K12 515 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 TGIF2Q9GZN2 237 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 SLC6A16Q9GZN6 736 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 MRPL46Q9H2W6 279 aaKnown RBP15.09■□□□□ 0.01
LIME1-209ENST00000494776 PPCSQ9HAB8 311 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 FBXL4Q9UKA2 621 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 MKL2Q9ULH7 1088 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 HEMK1Q9Y5R4 338 aaPredicted RBP15.09■□□□□ 0.01
LIME1-209ENST00000494776 HS3ST3B1Q9Y662 390 aa15.09■□□□□ 0.01
LIME1-209ENST00000494776 ATMQ13315 3056 aa15.08■□□□□ 0.01
LIME1-209ENST00000494776 LRRC14BA6NHZ5 514 aa15.08■□□□□ 0
LIME1-209ENST00000494776 IDSB3KWA1 339 aa15.08■□□□□ 0
LIME1-209ENST00000494776 SOCS6O14544 535 aa15.08■□□□□ 0
LIME1-209ENST00000494776 GALR3O60755 368 aaPredicted RBP15.08■□□□□ 0
LIME1-209ENST00000494776 PRAMEF4O60810 478 aa15.08■□□□□ 0
LIME1-209ENST00000494776 CLEC3AO75596 197 aa15.08■□□□□ 0
LIME1-209ENST00000494776 C1QL1O75973 258 aa15.08■□□□□ 0
LIME1-209ENST00000494776 SIX3O95343 332 aaPredicted RBP15.08■□□□□ 0
LIME1-209ENST00000494776 BMP10O95393 424 aa15.08■□□□□ 0
LIME1-209ENST00000494776 PYGBP11216 843 aa15.08■□□□□ 0
LIME1-209ENST00000494776 PCNAP12004 261 aa15.08■□□□□ 0
LIME1-209ENST00000494776 ACPPP15309 386 aa15.08■□□□□ 0
LIME1-209ENST00000494776 KRT15P19012 456 aa15.08■□□□□ 0
LIME1-209ENST00000494776 EPORP19235 508 aa15.08■□□□□ 0
LIME1-209ENST00000494776 TAC1P20366 129 aa15.08■□□□□ 0
LIME1-209ENST00000494776 EEF1DP29692 281 aaKnown RBP15.08■□□□□ 0
LIME1-209ENST00000494776 HSD17B3P37058 310 aa15.08■□□□□ 0
LIME1-209ENST00000494776 GTF2H2Q13888 395 aa15.08■□□□□ 0
LIME1-209ENST00000494776 PCBP2Q15366 365 aaKnown RBP eCLIP15.08■□□□□ 0
LIME1-209ENST00000494776 TUBB8Q3ZCM7 444 aa15.08■□□□□ 0
LIME1-209ENST00000494776 PRAMEF9Q5VWM5 478 aa15.08■□□□□ 0
LIME1-209ENST00000494776 GTF2H2CQ6P1K8 395 aa15.08■□□□□ 0
LIME1-209ENST00000494776 MED27Q6P2C8 311 aa15.08■□□□□ 0
LIME1-209ENST00000494776 KIRREL2Q6UWL6 708 aa15.08■□□□□ 0
LIME1-209ENST00000494776 ZC3H7AQ8IWR0 971 aaKnown RBP15.08■□□□□ 0
LIME1-209ENST00000494776 AFAP1L2Q8N4X5 818 aa15.08■□□□□ 0
LIME1-209ENST00000494776 ACMSDQ8TDX5 336 aa15.08■□□□□ 0
LIME1-209ENST00000494776 METTL21AQ8WXB1 218 aa15.08■□□□□ 0
LIME1-209ENST00000494776 ATP6V1E2Q96A05 226 aa15.08■□□□□ 0
LIME1-209ENST00000494776 PEX11GQ96HA9 241 aa15.08■□□□□ 0
LIME1-209ENST00000494776 KLHL31Q9H511 634 aa15.08■□□□□ 0
LIME1-209ENST00000494776 ACTR8Q9H981 624 aa15.08■□□□□ 0
LIME1-209ENST00000494776 ATP13A2Q9NQ11 1180 aa15.08■□□□□ 0
LIME1-209ENST00000494776 COPG2Q9UBF2 871 aa15.08■□□□□ 0
LIME1-209ENST00000494776 TP53TG5Q9Y2B4 290 aa15.08■□□□□ 0
LIME1-209ENST00000494776 CCDC88CQ9P219 2028 aa15.07■□□□□ 0
LIME1-209ENST00000494776 A0A088AWK7 358 aa15.07■□□□□ 0
LIME1-209ENST00000494776 STX16-NPEPL1H3BU86 382 aa15.07■□□□□ 0
LIME1-209ENST00000494776 STX16O14662 325 aa15.07■□□□□ 0
LIME1-209ENST00000494776 JRKO75564 520 aa15.07■□□□□ 0
LIME1-209ENST00000494776 WFS1O76024 890 aa15.07■□□□□ 0
LIME1-209ENST00000494776 B3GALT4O96024 378 aa15.07■□□□□ 0
LIME1-209ENST00000494776 CD22P20273 847 aa15.07■□□□□ 0
LIME1-209ENST00000494776 ZNF10P21506 573 aaPredicted RBP15.07■□□□□ 0
LIME1-209ENST00000494776 CASP2P42575 452 aa15.07■□□□□ 0
LIME1-209ENST00000494776 PGDP52209 483 aa15.07■□□□□ 0
LIME1-209ENST00000494776 OLR1P78380 273 aa15.07■□□□□ 0
LIME1-209ENST00000494776 IFFO1Q0D2I5 559 aa15.07■□□□□ 0
LIME1-209ENST00000494776 HYAL2Q12891 473 aa15.07■□□□□ 0
LIME1-209ENST00000494776 AIMP2Q13155 320 aaKnown RBP15.07■□□□□ 0
LIME1-209ENST00000494776 RAPSNQ13702 412 aa15.07■□□□□ 0
LIME1-209ENST00000494776 ERCC6LQ2NKX8 1250 aa15.07■□□□□ 0
LIME1-209ENST00000494776 IRAK1BP1Q5VVH5 260 aa15.07■□□□□ 0
LIME1-209ENST00000494776 TCTN3Q6NUS6 607 aa15.07■□□□□ 0
LIME1-209ENST00000494776 METTL2BQ6P1Q9 378 aaKnown RBP15.07■□□□□ 0
LIME1-209ENST00000494776 WDR93Q6P2C0 686 aa15.07■□□□□ 0
LIME1-209ENST00000494776 ASB18Q6ZVZ8 466 aa15.07■□□□□ 0
LIME1-209ENST00000494776 GOLGA7Q7Z5G4 137 aa15.07■□□□□ 0
LIME1-209ENST00000494776 ZNF605Q86T29 641 aa15.07■□□□□ 0
LIME1-209ENST00000494776 LCA5Q86VQ0 697 aa15.07■□□□□ 0
LIME1-209ENST00000494776 PTRH1Q86Y79 214 aaKnown RBP15.07■□□□□ 0
LIME1-209ENST00000494776 OR5T3Q8NGG3 340 aa15.07■□□□□ 0
LIME1-209ENST00000494776 GAL3ST3Q96A11 431 aa15.07■□□□□ 0
LIME1-209ENST00000494776 C8orf44Q96CB5 159 aa15.07■□□□□ 0
LIME1-209ENST00000494776 REXO4Q9GZR2 422 aaKnown RBP15.07■□□□□ 0
LIME1-209ENST00000494776 IPPKQ9H8X2 491 aa15.07■□□□□ 0
LIME1-209ENST00000494776 ZNF490Q9ULM2 529 aaPredicted RBP15.07■□□□□ 0
LIME1-209ENST00000494776 TLDC2A0PJX2 215 aa15.06■□□□□ 0
LIME1-209ENST00000494776 LRIT2A6NDA9 550 aa15.06■□□□□ 0
LIME1-209ENST00000494776 MASP2O00187 686 aa15.06■□□□□ 0
LIME1-209ENST00000494776 PSMD12O00232 456 aaPredicted RBP15.06■□□□□ 0
LIME1-209ENST00000494776 PCDH17O14917 1159 aa15.06■□□□□ 0
LIME1-209ENST00000494776 ERI3O43414 337 aaKnown RBP15.06■□□□□ 0
LIME1-209ENST00000494776 CHST10O43529 356 aa15.06■□□□□ 0
LIME1-209ENST00000494776 KLHL41O60662 606 aa15.06■□□□□ 0
LIME1-209ENST00000494776 ALOX12BO75342 701 aa15.06■□□□□ 0
LIME1-209ENST00000494776 NR1D1P20393 614 aa15.06■□□□□ 0
LIME1-209ENST00000494776 IL10P22301 178 aa15.06■□□□□ 0
LIME1-209ENST00000494776 ITGA3P26006 1051 aa15.06■□□□□ 0
LIME1-209ENST00000494776 PLA2G16P53816 162 aa15.06■□□□□ 0
LIME1-209ENST00000494776 BTN3A2P78410 334 aa15.06■□□□□ 0
LIME1-209ENST00000494776 TGM3Q08188 693 aa15.06■□□□□ 0
LIME1-209ENST00000494776 LIPJQ5W064 366 aa15.06■□□□□ 0
LIME1-209ENST00000494776 GRHL2Q6ISB3 625 aa15.06■□□□□ 0
LIME1-209ENST00000494776 TRIM40Q6P9F5 258 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms