RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 RGS1Q08116 209 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 CALCOCO2Q13137 446 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 PWP1Q13610 501 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 FRG1Q14331 258 aaKnown RBP9.04□□□□□ -0.96
MSH5-218ENST00000494646 HERC3Q15034 1050 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 TRADDQ15628 312 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 PPP1R3AQ16821 1122 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 SFT2D3Q587I9 215 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 ABHD17BQ5VST6 288 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 RPUSD3Q6P087 351 aaKnown RBP9.04□□□□□ -0.96
MSH5-218ENST00000494646 NXPE4Q6UWF7 544 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 FAM180AQ6UWF9 173 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 RIPOR1Q6ZS17 1223 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 FRA10AC1Q70Z53 315 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 TMPRSS11BQ86T26 416 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 CYP4X1Q8N118 509 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 AFAP1L2Q8N4X5 818 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 TBC1D19Q8N5T2 526 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 ANKRD53Q8N9V6 530 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 SPATA4Q8NEY3 305 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 UTP15Q8TED0 518 aaKnown RBP9.04□□□□□ -0.96
MSH5-218ENST00000494646 ESAMQ96AP7 390 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 PTCHD1Q96NR3 888 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 SARGQ9BW04 601 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 LANCL2Q9NS86 450 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 ANKRD10Q9NXR5 420 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 C19orf25Q9UFG5 118 aaPredicted RBP9.04□□□□□ -0.96
MSH5-218ENST00000494646 ZFP69BQ9UJL9 534 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 SLC5A6Q9Y289 635 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 KCNE2Q9Y6J6 123 aa9.04□□□□□ -0.96
MSH5-218ENST00000494646 ITPR2Q14571 2701 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 EML6Q6ZMW3 1958 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 A0A0G2JN53 185 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 OR5H15A6NDH6 313 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 WIPF3A6NGB9 483 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 FAM227AF5H4B4 570 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 E2F3O00716 465 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 PCDH17O14917 1159 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 PHGDHO43175 533 aaKnown RBP9.03□□□□□ -0.96
MSH5-218ENST00000494646 MAN1A2O60476 641 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 H2AFYO75367 372 aaKnown RBP9.03□□□□□ -0.96
MSH5-218ENST00000494646 WISP2O76076 250 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 WDR47O94967 919 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 CLDN1O95832 211 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 LDLRP01130 860 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 FHP07954 510 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 CCDC166P0CW27 439 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 AHRP35869 848 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 GMPRP36959 345 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 PLTPP55058 493 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 KCNK10P57789 538 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 OR4D2P58180 307 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 PMP22Q01453 160 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 HYAL2Q12891 473 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 USP10Q14694 798 aaKnown RBP9.03□□□□□ -0.96
MSH5-218ENST00000494646 ABRAXAS2Q15018 415 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 TOR1AIP1Q5JTV8 583 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 PAPD4Q6PIY7 484 aaKnown RBP9.03□□□□□ -0.96
MSH5-218ENST00000494646 C3orf62Q6ZUJ4 267 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 MAATS1Q7Z4T9 603 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 CCDC25Q86WR0 208 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 CRLF3Q8IUI8 442 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 BCORP1Q8N888 145 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 BBOF1Q8ND07 529 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 SUN3Q8TAQ9 357 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 M1APQ8TC57 530 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 NT5CQ8TCD5 201 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 TBC1D20Q96BZ9 403 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 RHBDF1Q96CC6 855 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 VPS39Q96JC1 886 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 ZNF354BQ96LW1 612 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 AIF1LQ9BQI0 150 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 FAM129AQ9BZQ8 928 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 AICDAQ9GZX7 198 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 RHOJQ9H4E5 214 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 CDCP1Q9H5V8 836 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 PELI2Q9HAT8 420 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 OLAHQ9NV23 265 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 NSMCE4AQ9NXX6 385 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 WHRNQ9P202 907 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 TEKT2Q9UIF3 430 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 BOLA1Q9Y3E2 137 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 OARD1Q9Y530 152 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 PCNX1Q96RV3 2341 aa9.03□□□□□ -0.96
MSH5-218ENST00000494646 C4orf51C9J302 202 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 TAPBPO15533 448 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 PRMT3O60678 531 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 PRAMEF2O60811 474 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 FAM155BO75949 473 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 RASAL1O95294 804 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 SMIM10L1P0DMW3 83 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 C1GALT1C1LP0DN25 315 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 IL10P22301 178 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 CD96P40200 585 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 AGTR2P50052 363 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 GPX6P59796 221 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 AP2B1P63010 937 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 BTN3A2P78410 334 aa9.02□□□□□ -0.97
MSH5-218ENST00000494646 REEP5Q00765 189 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 460.4 ms