RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 C8orf59Q8N0T1 100 aaPredicted RBP13.25□□□□□ -0.29
VCP-207ENST00000493886 OR13F1Q8NGS4 319 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 COX14Q96I36 57 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 MCOLN1Q9GZU1 580 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 ITM2CQ9NQX7 267 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 PRKAB1Q9Y478 270 aa13.25□□□□□ -0.29
VCP-207ENST00000493886 DOCK8Q8NF50 2099 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 C5orf42Q9H799 3197 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 AXIN1O15169 862 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 SCN2BO60939 215 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 PRSS23O95084 383 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 RETP07949 1114 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 CYP4B1P13584 511 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 PNLIPRP1P54315 467 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 C21orf58P58505 322 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 RPS13P62277 151 aaKnown RBP13.24□□□□□ -0.29
VCP-207ENST00000493886 TAP2Q03519 686 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 KCNAB2Q13303 367 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 SUZ12Q15022 739 aaKnown RBP13.24□□□□□ -0.29
VCP-207ENST00000493886 PON2Q15165 354 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 DOK6Q6PKX4 331 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 RFPL4BQ6ZWI9 263 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 THAP5Q7Z6K1 395 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 GALNT5Q7Z7M9 940 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 GALNT10Q86SR1 603 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 SLC15A4Q8N697 577 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 OR8J2Q8NGG1 315 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 ZNF420Q8TAQ5 688 aaPredicted RBP13.24□□□□□ -0.29
VCP-207ENST00000493886 CHTF18Q8WVB6 975 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 PLEKHA8Q96JA3 519 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 PANX1Q96RD7 426 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 CSF3RQ99062 836 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 CDCA3Q99618 268 aaPredicted RBP13.24□□□□□ -0.29
VCP-207ENST00000493886 PBX4Q9BYU1 374 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 ZDHHC5Q9C0B5 715 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 DCAF13Q9NV06 445 aaKnown RBP13.24□□□□□ -0.29
VCP-207ENST00000493886 PCM1Q15154 2024 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 ARHGAP33O14559 1287 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 FPGTO14772 594 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 C1QCP02747 245 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 ALDH4A1P30038 563 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 DRD3P35462 400 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 WASP42768 502 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 SLBPQ14493 270 aaKnown RBP eCLIP13.24□□□□□ -0.29
VCP-207ENST00000493886 ADAMTSL4Q6UY14 1074 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 PRR23CQ6ZRP0 262 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 PIWIL3Q7Z3Z3 882 aaKnown RBP13.24□□□□□ -0.29
VCP-207ENST00000493886 HEATR4Q86WZ0 1026 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 LRRC56Q8IYG6 542 aaPredicted RBP13.24□□□□□ -0.29
VCP-207ENST00000493886 REPS1Q96D71 796 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 REXO5Q96IC2 774 aaKnown RBP13.24□□□□□ -0.29
VCP-207ENST00000493886 OR52A5Q9H2C5 316 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 FAM120CQ9NX05 1096 aaKnown RBP13.24□□□□□ -0.29
VCP-207ENST00000493886 TRANK1O15050 2925 aa13.24□□□□□ -0.29
VCP-207ENST00000493886 IGLON5A6NGN9 336 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 EPOPA6NHQ4 379 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 EVPLLA8MZ36 301 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 ZNF701M0R085 212 aaPredicted RBP13.23□□□□□ -0.29
VCP-207ENST00000493886 TOR1BO14657 336 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 BCL10O95999 233 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 PCCBP05166 539 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 ANXA4P09525 319 aaPredicted RBP13.23□□□□□ -0.29
VCP-207ENST00000493886 C1GALT1C1LP0DN25 315 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 CRHBPP24387 322 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 PLA2G16P53816 162 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 LSM3P62310 102 aaKnown RBP13.23□□□□□ -0.29
VCP-207ENST00000493886 SLC14A1Q13336 389 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 NR1D2Q14995 579 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 SPIN4Q56A73 249 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 PNCKQ6P2M8 343 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 Q6ZNX1 250 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 ZNF551Q7Z340 670 aaPredicted RBP13.23□□□□□ -0.29
VCP-207ENST00000493886 CROCCP3Q8IVE0 287 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 GPR156Q8NFN8 814 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 NETO1Q8TDF5 533 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 STARD8Q92502 1023 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 WDR34Q96EX3 536 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 MBOAT4Q96T53 435 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 DOK1Q99704 481 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 KXD1Q9BQD3 176 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 EFCAB11Q9BUY7 163 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 FAIMQ9NVQ4 179 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 FKBP14Q9NWM8 211 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 STON1Q9Y6Q2 735 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 H0YAE9 185 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 SCAMP2O15127 329 aaKnown RBP13.23□□□□□ -0.29
VCP-207ENST00000493886 MID1O15344 667 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 XPNPEP2O43895 674 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 MITFO75030 526 aaPredicted RBP13.23□□□□□ -0.29
VCP-207ENST00000493886 HTR1AP08908 422 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 LAMP1P11279 417 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 S100A5P33763 92 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 EIF2DP41214 584 aaKnown RBP13.23□□□□□ -0.29
VCP-207ENST00000493886 ASMTP46597 345 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 CD47Q08722 323 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 SNX29P2Q8IUI4 249 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 CNIH3Q8TBE1 160 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 NKX2-4Q9H2Z4 354 aa13.23□□□□□ -0.29
VCP-207ENST00000493886 CCDC177Q9NQR7 707 aaPredicted RBP13.23□□□□□ -0.29
VCP-207ENST00000493886 FAM118AQ9NWS6 357 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms