RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 PRNPP04156 253 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 HOXA9P31269 272 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 TIA1P31483 386 aaKnown RBP eCLIP12.36□□□□□ -0.436e-12■■■■■ 39.4
PRAME-213ENST00000492657 PLA2G16P53816 162 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 TMBIM6P55061 237 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 MOGQ16653 247 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 PRSS53Q2L4Q9 553 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 COX20Q5RI15 118 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 MFSD4BQ5TF39 518 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 LAIR1Q6GTX8 287 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 CAPN13Q6MZZ7 669 aaPredicted RBP12.36□□□□□ -0.43
PRAME-213ENST00000492657 SHQ1Q6PI26 577 aaKnown RBP12.36□□□□□ -0.43
PRAME-213ENST00000492657 MMAAQ8IVH4 418 aaKnown RBP12.36□□□□□ -0.43
PRAME-213ENST00000492657 HDAC2Q92769 488 aaKnown RBP12.36□□□□□ -0.43
PRAME-213ENST00000492657 CIDECQ96AQ7 238 aaPredicted RBP12.36□□□□□ -0.43
PRAME-213ENST00000492657 SORBS1Q9BX66 1292 aaKnown RBP12.36□□□□□ -0.43
PRAME-213ENST00000492657 BRF2Q9HAW0 419 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 RAPGEFL1Q9UHV5 662 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 C3orf18Q9UK00 162 aa12.36□□□□□ -0.43
PRAME-213ENST00000492657 PLXND1Q9Y4D7 1925 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 C1orf226A1L170 272 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 GRXCR1A8MXD5 290 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 ZNF197O14709 1029 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 KDM1AO60341 852 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 SULT1C4O75897 302 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 KLHL18O94889 574 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 ADH1CP00326 375 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 TNFRSF1BP20333 461 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 MAGP20916 626 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 IGFBP5P24593 272 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 RAD23AP54725 363 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 TAP2Q03519 686 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 FAM78AQ5JUQ0 283 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 RBM48Q5RL73 367 aaKnown RBP12.35□□□□□ -0.43
PRAME-213ENST00000492657 ANGPTL8Q6UXH0 198 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 COMMD6Q7Z4G1 85 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 MMP21Q8N119 569 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 CADM3Q8N126 398 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 SYNPOQ8N3V7 929 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 OR4A15Q8NGL6 344 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 OR9A1PQ8NGU1 263 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 ACAT2Q9BWD1 397 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 KLHL25Q9H0H3 589 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 SIRT5Q9NXA8 310 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 PDP1Q9P0J1 537 aaPredicted RBP12.35□□□□□ -0.43
PRAME-213ENST00000492657 CCDC88CQ9P219 2028 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 BCKDKO14874 412 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 HOXC11O43248 304 aaPredicted RBP12.35□□□□□ -0.43
PRAME-213ENST00000492657 GCM2O75603 506 aaPredicted RBP12.35□□□□□ -0.43
PRAME-213ENST00000492657 PAPLNO95428 1278 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 FABP3P05413 133 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 ADRB3P13945 408 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 ITGB7P26010 798 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 FMO3P31513 532 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 CLK3P49761 638 aaKnown RBP12.35□□□□□ -0.43
PRAME-213ENST00000492657 IL5RAQ01344 420 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 PPIGQ13427 754 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRAME-213ENST00000492657 ZNF234Q14588 700 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 SPCS2Q15005 226 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 SKIV2LQ15477 1246 aaKnown RBP12.35□□□□□ -0.43
PRAME-213ENST00000492657 HNRNPA1L2Q32P51 320 aaKnown RBP12.35□□□□□ -0.43
PRAME-213ENST00000492657 ZNF691Q5VV52 312 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 NPAS3Q8IXF0 933 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 KLHDC8AQ8IYD2 350 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 WFIKKN2Q8TEU8 576 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 ZFP90Q8TF47 636 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 UBE2FQ969M7 185 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 COQ8BQ96D53 544 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 TM9SF3Q9HD45 589 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 GPATCH2Q9NW75 528 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 ACSL6Q9UKU0 697 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 PSME2Q9UL46 239 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 SLC27A6Q9Y2P4 619 aa12.35□□□□□ -0.43
PRAME-213ENST00000492657 CFAP20Q9Y6A4 193 aaKnown RBP12.35□□□□□ -0.43
PRAME-213ENST00000492657 TMEM229AB2RXF0 380 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 OPN1SWP03999 348 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 SEMG1P04279 462 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 C1GALT1C1LP0DN25 315 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 HSD3B1P14060 373 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 JUNBP17275 347 aaPredicted RBP12.34□□□□□ -0.43
PRAME-213ENST00000492657 TCEA1P23193 301 aaKnown RBP12.34□□□□□ -0.43
PRAME-213ENST00000492657 HSD3B2P26439 372 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 IFITM3Q01628 133 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 CDK5R2Q13319 367 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 SF3B4Q15427 424 aaKnown RBP eCLIP12.34□□□□□ -0.432e-46■□□□□ 9
PRAME-213ENST00000492657 RGNQ15493 299 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 CBLL1Q75N03 491 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 EIF3MQ7L2H7 374 aaKnown RBP12.34□□□□□ -0.43
PRAME-213ENST00000492657 LRRC56Q8IYG6 542 aaPredicted RBP12.34□□□□□ -0.43
PRAME-213ENST00000492657 HCAR2Q8TDS4 363 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 RAB2BQ8WUD1 216 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 CHPT1Q8WUD6 406 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 OR8D1Q8WZ84 308 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 MIR1-1HGQ9H1L0 117 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 CERS4Q9HA82 394 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 TM7SF3Q9NS93 570 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 DEC1Q9P2X7 70 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 DYRK1BQ9Y463 629 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 PIPSLA2A3N6 862 aa12.34□□□□□ -0.43
PRAME-213ENST00000492657 PSMD11O00231 422 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms