RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 GSTK1Q9Y2Q3 226 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 CACNA1CQ13936 2221 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 ZNF638Q14966 1978 aaKnown RBP9.48□□□□□ -0.89
ERCC3-208ENST00000491292 GLYATL1P3A0A0U1RQE8 302 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 PCDH17O14917 1159 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 CACNG3O60359 315 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 CYP17A1P05093 508 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 NAT1P18440 290 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 RPL9P32969 192 aaKnown RBP9.48□□□□□ -0.89
ERCC3-208ENST00000491292 ATP5C1P36542 298 aaKnown RBP9.48□□□□□ -0.89
ERCC3-208ENST00000491292 MAN2A2P49641 1150 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 CPT1AP50416 773 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 RPS26P62854 115 aaKnown RBP9.48□□□□□ -0.89
ERCC3-208ENST00000491292 HOXC5Q00444 222 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 RPL6Q02878 288 aaKnown RBP9.48□□□□□ -0.89
ERCC3-208ENST00000491292 TARDBPQ13148 414 aaKnown RBP eCLIP9.48□□□□□ -0.89
ERCC3-208ENST00000491292 TUSC3Q13454 348 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 USP45Q70EL2 814 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 NATD1Q8N6N6 113 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 LMNTD1Q8N9Z9 388 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 TMEM121BQ9BXQ6 578 aaPredicted RBP9.48□□□□□ -0.89
ERCC3-208ENST00000491292 MED28Q9H204 178 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 MCUBQ9NWR8 336 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 TRPV2Q9Y5S1 764 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 PRSS21Q9Y6M0 314 aa9.48□□□□□ -0.89
ERCC3-208ENST00000491292 A0A0G2JLL6 359 aaPredicted RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PRR23D1E9PI22 279 aaPredicted RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 TLR4O00206 839 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 TEX28O15482 410 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 TBL1XO60907 577 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CH25HO95992 272 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PRR23D2P0DMB1 279 aaPredicted RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 NR2F6P10588 404 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CBLP22681 906 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 APEX1P27695 318 aaKnown RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CSTF2P33240 577 aaKnown RBP eCLIP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 TGFBR2P37173 567 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CLDN8P56748 225 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CXCR4P61073 352 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 TATDN3Q17R31 274 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 FRG2Q64ET8 278 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PRRT2Q7Z6L0 340 aaPredicted RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PIGKQ92643 395 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 FRG2BQ96QU4 278 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CHIAQ9BZP6 476 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CLMPQ9H6B4 373 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 RNF121Q9H920 327 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 ANKRA2Q9H9E1 313 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 POFUT2Q9Y2G5 429 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 UBR3Q6ZT12 1888 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 TRBC2A0A5B9 178 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 HMX3A6NHT5 357 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 K7ERQ8 282 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 SEPT4O43236 478 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 SSNA1O43805 119 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PCDH7O60245 1069 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 GGT2P36268 569 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 TALDO1P37837 337 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 OR3A3P47888 321 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 ZFP36L2P47974 494 aaKnown RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 SCARB2Q14108 478 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 TBCEQ15813 527 aaPredicted RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 FLYWCH1Q4VC44 716 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CLEC12AQ5QGZ9 265 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 ATAT1Q5SQI0 421 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CAPN13Q6MZZ7 669 aaPredicted RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 B3GLCTQ6Y288 498 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 ADCK2Q7Z695 626 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CHPFQ8IZ52 775 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 SLC38A6Q8IZM9 456 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 Q8N402 240 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 KAT2AQ92830 837 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CRELD1Q96HD1 420 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 MAP6Q96JE9 813 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 FLRT1Q9NZU1 646 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PTGFRNQ9P2B2 879 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 NDRG4Q9ULP0 352 aaKnown RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 MAPRE3Q9UPY8 281 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 GRIP1Q9Y3R0 1128 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 ENTPD6O75354 484 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PRAMEF12O95522 483 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 IFNW1P05000 195 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 EBLN1P0CF75 366 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 ITGA2P17301 1181 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 RPL17P18621 184 aaKnown RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PRPS1L1P21108 318 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CSRP3P50461 194 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 ZNF140P52738 457 aaPredicted RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 C2orf80Q0P641 193 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 POU4F3Q15319 338 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 UPP1Q16831 310 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PAQR6Q6TCH4 344 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 TMPRSS11BQ86T26 416 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 NLRP8Q86W28 1048 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 PMEPA1Q969W9 287 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 MYO19Q96H55 970 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 CCDC115Q96NT0 180 aa9.47□□□□□ -0.89
ERCC3-208ENST00000491292 MKRN2Q9H000 416 aaKnown RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 POLR2J3Q9H1A7 115 aaKnown RBP9.47□□□□□ -0.89
ERCC3-208ENST00000491292 SERHL2Q9H4I8 314 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms