RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 NDPQ00604 133 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 CNTN2Q02246 1040 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 KRT33BQ14525 404 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 C3AR1Q16581 482 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 ASTE1Q2TB18 679 aaPredicted RBP2.98□□□□□ -1.93
PHC3-213ENST00000491258 FAM98BQ52LJ0 330 aaKnown RBP2.98□□□□□ -1.93
PHC3-213ENST00000491258 LCN1P1Q5VSP4 162 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 NOTUMQ6P988 496 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 CLEC17AQ6ZS10 378 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 CDHR3Q6ZTQ4 885 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 TICAM2Q86XR7 235 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 FAM133AQ8N9E0 248 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 OR5M8Q8NGP6 311 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 MORC4Q8TE76 937 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 CHURC1Q8WUH1 139 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 EVI5LQ96CN4 794 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 GUCD1Q96NT3 240 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 OR6C1Q96RD1 312 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 PSMB7Q99436 277 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 NAPBQ9H115 298 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 CHMP1AQ9HD42 196 aaPredicted RBP2.98□□□□□ -1.93
PHC3-213ENST00000491258 UBN1Q9NPG3 1134 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 TNFRSF19Q9NS68 423 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 CACNA1SQ13698 1873 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 RANBP2P49792 3224 aaKnown RBP2.98□□□□□ -1.93
PHC3-213ENST00000491258 ROBO3Q96MS0 1386 aa2.98□□□□□ -1.93
PHC3-213ENST00000491258 MKI67P46013 3256 aaKnown RBP2.97□□□□□ -1.93
PHC3-213ENST00000491258 ELP1O95163 1332 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 MAST4O15021 2626 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 TSPY2A6NKD2 308 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 PHF1O43189 567 aaPredicted RBP2.97□□□□□ -1.93
PHC3-213ENST00000491258 RANBP6O60518 1105 aaKnown RBP2.97□□□□□ -1.93
PHC3-213ENST00000491258 CDK2AP2O75956 126 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 DDHD2O94830 711 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 TIMP1P01033 207 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 HSPD1P10809 573 aaKnown RBP2.97□□□□□ -1.93
PHC3-213ENST00000491258 CDH3P22223 829 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 PDHA2P29803 388 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 STAT2P52630 851 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 SNAP25P60880 206 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 GCNT1Q02742 428 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 BAATQ14032 418 aaPredicted RBP2.97□□□□□ -1.93
PHC3-213ENST00000491258 EFTUD2Q15029 972 aaKnown RBP eCLIP2.97□□□□□ -1.932e-6■■■■■ 39.1
PHC3-213ENST00000491258 HERC3Q15034 1050 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 MCMDC2Q4G0Z9 681 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 NCEH1Q6PIU2 408 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 ARMCX2Q7L311 632 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 CHMP1BQ7LBR1 199 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 TIPARPQ7Z3E1 657 aaKnown RBP2.97□□□□□ -1.93
PHC3-213ENST00000491258 FAM131BQ86XD5 332 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 ZFAND4Q86XD8 727 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 RHOXF1Q8NHV9 184 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 ZNF597Q96LX8 424 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 CDX2Q99626 313 aaPredicted RBP2.97□□□□□ -1.93
PHC3-213ENST00000491258 FNDC11Q9BVV2 318 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 FAM49AQ9H0Q0 323 aaPredicted RBP2.97□□□□□ -1.93
PHC3-213ENST00000491258 CYP39A1Q9NYL5 469 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 DAPK2Q9UIK4 370 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 TBX21Q9UL17 535 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 STX8Q9UNK0 236 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 Q9Y3F1 56 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 WIPI2Q9Y4P8 454 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 DDX49Q9Y6V7 483 aaKnown RBP2.97□□□□□ -1.93
PHC3-213ENST00000491258 KIF25-AS1Q9Y6Z4 181 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 PLIN4Q96Q06 1357 aa2.97□□□□□ -1.93
PHC3-213ENST00000491258 DICER1Q9UPY3 1922 aaKnown RBP2.97□□□□□ -1.93
PHC3-213ENST00000491258 ASTN1O14525 1302 aa2.96□□□□□ -1.93
PHC3-213ENST00000491258 GRIN2DO15399 1336 aa2.96□□□□□ -1.93
PHC3-213ENST00000491258 UMODL1Q5DID0 1318 aa2.96□□□□□ -1.93
PHC3-213ENST00000491258 SYNRGQ9UMZ2 1314 aa2.96□□□□□ -1.93
PHC3-213ENST00000491258 VIRMAQ69YN4 1812 aaKnown RBP2.96□□□□□ -1.94
PHC3-213ENST00000491258 A0A0D9SFI3 127 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 A0A0U1RQG5 324 aaPredicted RBP2.96□□□□□ -1.94
PHC3-213ENST00000491258 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.96□□□□□ -1.94
PHC3-213ENST00000491258 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.96□□□□□ -1.94
PHC3-213ENST00000491258 ZNF840PA6NDX5 716 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 CABYRO75952 493 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 CD4P01730 458 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 IGHDP01880 384 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 CLEC3BP05452 202 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 ASGR1P07306 291 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 TOP1P11387 765 aaKnown RBP2.96□□□□□ -1.94
PHC3-213ENST00000491258 CCR9P51686 369 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 TPD52P55327 224 aaPredicted RBP2.96□□□□□ -1.94
PHC3-213ENST00000491258 XGP55808 180 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 BEX3Q00994 111 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 NUCB1Q02818 461 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 JADE1Q6IE81 842 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 CXCL17Q6UXB2 119 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 HAUS6Q7Z4H7 955 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 CPLX4Q7Z7G2 160 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 ZNF589Q86UQ0 364 aaPredicted RBP2.96□□□□□ -1.94
PHC3-213ENST00000491258 TBC1D10CQ8IV04 446 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 SMC5Q8IY18 1101 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 ARHGAP24Q8N264 748 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 CD177Q8N6Q3 437 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 KLHDC1Q8N7A1 406 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 PDILTQ8N807 584 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 OR11H4Q8NGC9 324 aa2.96□□□□□ -1.94
PHC3-213ENST00000491258 OR2AJ1Q8NGZ0 328 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms