RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 WDR41Q9HAD4 459 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 EPHA6Q9UF33 1036 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 GMEB2Q9UKD1 530 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 PI4KAP42356 2102 aa20.66■□□□□ 0.9
SMC4-221ENST00000489573 RTCAO00442 366 aaKnown RBP20.65■□□□□ 0.9
SMC4-221ENST00000489573 GBAP04062 536 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 ST6GAL1P15907 406 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 TPP2P29144 1249 aaPredicted RBP20.65■□□□□ 0.9
SMC4-221ENST00000489573 DGKQP52824 942 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 OR1D5P58170 312 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 RGS1Q08116 209 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 PWP1Q13610 501 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 TLR1Q15399 786 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 NR0B2Q15466 257 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 UBE3DQ7Z6J8 389 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 OR2I1PQ8NGU4 316 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 GFM2Q969S9 779 aaKnown RBP20.65■□□□□ 0.9
SMC4-221ENST00000489573 MS4A6EQ96DS6 147 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 AHCYL2Q96HN2 611 aaKnown RBP20.65■□□□□ 0.9
SMC4-221ENST00000489573 MACROD1Q9BQ69 325 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 SLC6A16Q9GZN6 736 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 ARRDC1-AS1Q9H2J1 176 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 MMADHCQ9H3L0 296 aaPredicted RBP20.65■□□□□ 0.9
SMC4-221ENST00000489573 C1GALT1Q9NS00 363 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 MAP10Q9P2G4 905 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 ADAM29Q9UKF5 820 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 RAB23Q9ULC3 237 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 R4GN57 208 aa20.65■□□□□ 0.9
SMC4-221ENST00000489573 IGHV1OR21-1A0A087WYE8 117 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 CAPN5O15484 640 aaPredicted RBP20.64■□□□□ 0.9
SMC4-221ENST00000489573 AKAP10O43572 662 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 PRAMEF10O60809 474 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 MYF5P13349 255 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 ARFIP1P53367 373 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 STXBP1P61764 594 aaKnown RBP20.64■□□□□ 0.9
SMC4-221ENST00000489573 DPY19L1Q2PZI1 675 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 CCNYL2Q5T2Q4 361 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 FAM92BQ6ZTR7 304 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 SRFBP1Q8NEF9 429 aaKnown RBP20.64■□□□□ 0.9
SMC4-221ENST00000489573 OR6C4Q8NGE1 309 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 C16orf78Q8WTQ4 265 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 NCSTNQ92542 709 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 TM4SF19Q96DZ7 209 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 MAP3K3Q99759 626 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 THTPAQ9BU02 230 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 KLHL31Q9H511 634 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 MYNNQ9NPC7 610 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 LHX9Q9NQ69 397 aa20.64■□□□□ 0.9
SMC4-221ENST00000489573 ARHGAP10A1A4S6 786 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 TLCD2A6NGC4 264 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 H0YHG0 523 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 SCAMP2O15127 329 aaKnown RBP20.63■□□□□ 0.89
SMC4-221ENST00000489573 ERI3O43414 337 aaKnown RBP20.63■□□□□ 0.89
SMC4-221ENST00000489573 DUX1O43812 170 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 KLHL18O94889 574 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 PGRP06401 933 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 SLC35G6P0C7Q6 338 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 S100A3P33764 101 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 HPCAL1P37235 193 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 SSR2P43308 183 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 PLA2G16P53816 162 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 GFERP55789 205 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 GPLD1P80108 840 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 PAGE3Q5JUK9 113 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 NKAIN2Q5VXU1 208 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 OR4C11Q6IEV9 310 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 ZC3H14Q6PJT7 736 aaKnown RBP20.63■□□□□ 0.89
SMC4-221ENST00000489573 FAM181AQ8N9Y4 354 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 OR2L5Q8NG80 312 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.63■□□□□ 0.892e-6■■■■■ 54.3
SMC4-221ENST00000489573 RERGQ96A58 199 aaPredicted RBP20.63■□□□□ 0.89
SMC4-221ENST00000489573 ZDHHC12Q96GR4 267 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 TGM7Q96PF1 710 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 CD180Q99467 661 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 C17orf62Q9BQA9 187 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 GTPBP2Q9BX10 602 aaKnown RBP20.63■□□□□ 0.89
SMC4-221ENST00000489573 DDX31Q9H8H2 851 aaKnown RBP20.63■□□□□ 0.89
SMC4-221ENST00000489573 GID8Q9NWU2 228 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 CROTQ9UKG9 612 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 SLC9B1P1A6NJY1 282 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 PRR33A8MZF0 331 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 SIGLEC6O43699 453 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 PCDHGA12O60330 932 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 COX7A2P14406 83 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 MAPK12P53778 367 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 TGM3Q08188 693 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 NFYCQ13952 458 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 CCDC6Q16204 474 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 UGT8Q16880 541 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 FRMPD2BQ6IN97 320 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 TRIM40Q6P9F5 258 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 SLC2A7Q6PXP3 512 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 IKBIPQ70UQ0 350 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 TMEM132CQ8N3T6 1108 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 CAMKVQ8NCB2 501 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 GAL3ST3Q96A11 431 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 CCDC74AQ96AQ1 378 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 KCNC2Q96PR1 638 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 SMOC1Q9H4F8 434 aa20.63■□□□□ 0.89
SMC4-221ENST00000489573 PRPF19Q9UMS4 504 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms