RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 C3orf14Q9HBI5 128 aa11.93□□□□□ -0.5
TMEM39B-208ENST00000487305 PCDH12Q9NPG4 1184 aa11.93□□□□□ -0.5
TMEM39B-208ENST00000487305 M0R082 166 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 ATG13O75143 517 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 DIRAS1O95057 198 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 CXCL10P02778 98 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 GABRB1P18505 474 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 RHCEP18577 417 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 EPHA2P29317 976 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 TIE1P35590 1138 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 RECQLP46063 649 aaPredicted RBP11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 PCYT1AP49585 367 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 PRIM2P49643 509 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 UGT2B15P54855 530 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 PDE7AQ13946 482 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 DEPDC1Q5TB30 811 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 SLX4IPQ5VYV7 408 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 HIST2H2AA3Q6FI13 130 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 GPR153Q6NV75 609 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 GDPD4Q6W3E5 623 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 C1orf52Q8N6N3 182 aaKnown RBP11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 IL17RCQ8NAC3 791 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 OR7G3Q8NG95 312 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 TMEM169Q96HH4 297 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 HEPHQ9BQS7 1158 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 CLN6Q9NWW5 311 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 STOX2Q9P2F5 926 aaPredicted RBP11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 B4GALT6Q9UBX8 382 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 SRRDQ9UH36 339 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 ERVK-11Q9UQG0 969 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 ANGPT4Q9Y264 503 aa11.92□□□□□ -0.5
TMEM39B-208ENST00000487305 TRAV19A0A0A6YYK7 116 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 ZBBXA8MT70 800 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 MAN1A2O60476 641 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 GNRH1P01148 92 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 URODP06132 367 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 CD22P20273 847 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 S100A1P23297 94 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 ALDH4A1P30038 563 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 DNASE1L3Q13609 305 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 SCARB2Q14108 478 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 MEDAGQ5VYS4 303 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 RNLSQ5VYX0 342 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 VRK3Q8IV63 474 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 SLC5A8Q8N695 610 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 TTC16Q8NEE8 873 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 ST13P5Q8NFI4 369 aaPredicted RBP11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 LRIG1Q96JA1 1093 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 HHIPL1Q96JK4 782 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 MTERF1Q99551 399 aaKnown RBP11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 DPH2Q9BQC3 489 aaPredicted RBP11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 VN1R3Q9BXE9 311 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 ATG10Q9H0Y0 220 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 MYNNQ9NPC7 610 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 CFAP97Q9P2B7 532 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 TRAPPC4Q9Y296 219 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 ZNF451Q9Y4E5 1061 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 GNG14A0A1W2PPG7 69 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 TSPAN11A1L157 253 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 TTC36A6NLP5 189 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 ARHGEF33A8MVX0 844 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 E7EQ34 232 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 SNPHO15079 494 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 ASNA1O43681 348 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 PCDH7O60245 1069 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 GPR37L1O60883 481 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 CKMP06732 381 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 PABPC1P11940 636 aaKnown RBP11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 PTPN2P17706 415 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 GADD45AP24522 165 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 GKP32189 559 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 CD70P32970 193 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 HOXD12P35452 270 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 CRATP43155 626 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 LIMS1P48059 325 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 CRYBA2P53672 197 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 RAE1P78406 368 aaKnown RBP11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 SPIBQ01892 262 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 SP3Q02447 781 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 ZNF284Q2VY69 593 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 ARMCX4Q5H9R4 360 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 REM2Q8IYK8 340 aaPredicted RBP11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 LGI4Q8N135 537 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 NAGSQ8N159 534 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 NAT16Q8N8M0 369 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 POC5Q8NA72 575 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 RPL3LQ92901 407 aaKnown RBP11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 SLC35B4Q969S0 331 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 VOPP1Q96AW1 172 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 ZNF558Q96NG5 402 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 KCNC2Q96PR1 638 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 CTRCQ99895 268 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 CCM2Q9BSQ5 444 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 CDADC1Q9BWV3 514 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 HCSTQ9UBK5 93 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 GULP1Q9UBP9 304 aa11.91□□□□□ -0.5
TMEM39B-208ENST00000487305 TMPRSS11EQ9UL52 423 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms