RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 TPST2O60704 377 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 MATN4O95460 622 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 CSTF2P33240 577 aaKnown RBP eCLIP10.65□□□□□ -0.7
HDAC6-228ENST00000486227 RPS21P63220 83 aaKnown RBP10.65□□□□□ -0.7
HDAC6-228ENST00000486227 PMS2P3Q13401 168 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 IL18R1Q13478 541 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 ANGPT1Q15389 498 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 ATP6AP1Q15904 470 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 DUOXA1Q1HG43 343 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 BICRALQ6AI39 1079 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 HACD2Q6Y1H2 254 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 ZZZ3Q8IYH5 903 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 MRPL43Q8N983 215 aaKnown RBP10.65□□□□□ -0.7
HDAC6-228ENST00000486227 BIRC7Q96CA5 298 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 COPS4Q9BT78 406 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 ADAP2Q9NPF8 381 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 PPIEQ9UNP9 301 aaKnown RBP10.65□□□□□ -0.7
HDAC6-228ENST00000486227 NME7Q9Y5B8 376 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 PCDHGA10Q9Y5H3 936 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 FAM240BA0A1B0GVZ2 78 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 SOCS2O14508 198 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 NPC1O15118 1278 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 NOS1APO75052 506 aaPredicted RBP10.65□□□□□ -0.7
HDAC6-228ENST00000486227 PFKLP17858 780 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 RYKP34925 604 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 NCBP2P52298 156 aaKnown RBP eCLIP10.65□□□□□ -0.7
HDAC6-228ENST00000486227 ABRAXAS2Q15018 415 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 ZNF404Q494X3 552 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 NANOGP8Q6NSW7 305 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 MACC1Q6ZN28 852 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 TICAM1Q8IUC6 712 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 TTLQ8NG68 377 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 FAM110BQ8TC76 370 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 SLC22A12Q96S37 553 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 NANOGQ9H9S0 305 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 TPT1P8Q9HAU6 139 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 COPS7AQ9UBW8 275 aa10.65□□□□□ -0.7
HDAC6-228ENST00000486227 B3GALT2O43825 422 aa10.65□□□□□ -0.71
HDAC6-228ENST00000486227 COQ9O75208 318 aa10.65□□□□□ -0.71
HDAC6-228ENST00000486227 SNAP29O95721 258 aa10.65□□□□□ -0.71
HDAC6-228ENST00000486227 YES1P07947 543 aa10.65□□□□□ -0.71
HDAC6-228ENST00000486227 DUSP3P51452 185 aaPredicted RBP10.65□□□□□ -0.71
HDAC6-228ENST00000486227 ZNF155Q12901 538 aaPredicted RBP10.65□□□□□ -0.71
HDAC6-228ENST00000486227 LARS2Q15031 903 aaKnown RBP10.65□□□□□ -0.71
HDAC6-228ENST00000486227 TPRG1LQ5T0D9 272 aa10.65□□□□□ -0.71
HDAC6-228ENST00000486227 SLC34A3Q8N130 599 aa10.65□□□□□ -0.71
HDAC6-228ENST00000486227 CRISPLD1Q9H336 500 aa10.65□□□□□ -0.71
HDAC6-228ENST00000486227 TUBGCP6Q96RT7 1819 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 PRSS51A0A1B0GVH4 220 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 CCRL2O00421 344 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 HLA-DQA2P01906 255 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 FMO3P31513 532 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 RAB8AP61006 207 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 SLC13A2Q13183 592 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 SEMA3BQ13214 749 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 SCARB2Q14108 478 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 TAF13Q15543 124 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 GPR153Q6NV75 609 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 NOXRED1Q6NXP6 359 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 RASGRP3Q8IV61 690 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 OR4K1Q8NGD4 311 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 ZNF563Q8TA94 476 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 CNPPD1Q9BV87 410 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 GPR174Q9BXC1 333 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 XKR8Q9H6D3 395 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 RIMKLBQ9ULI2 386 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 CFL2Q9Y281 166 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 SPEF1Q9Y4P9 236 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 N6AMT1Q9Y5N5 214 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 SSC5DA1L4H1 1573 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 A0A1W2PQ72 361 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 H7BY64 318 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 NDUFS4O43181 175 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 TFPIP10646 304 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 ZNF24P17028 368 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 PSMA1P25786 263 aaKnown RBP10.64□□□□□ -0.71
HDAC6-228ENST00000486227 HTR6P50406 440 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 BMXP51813 675 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 KCTD11Q693B1 232 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 SLC9B2Q86UD5 537 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 KRTCAP2Q8N6L1 136 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 FAM3CQ92520 227 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 TRMT2BQ96GJ1 504 aaKnown RBP10.64□□□□□ -0.71
HDAC6-228ENST00000486227 PRAP1Q96NZ9 151 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 SORT1Q99523 831 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 TOR3AQ9H497 397 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 DLGAP4Q9Y2H0 992 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 LOC100130705A0A1B0GUX0 176 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 GADD45GO95257 159 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 PDYNP01213 254 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 KLKB1P03952 638 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 JUNP05412 331 aaKnown RBP10.64□□□□□ -0.71
HDAC6-228ENST00000486227 KLK3P07288 261 aaPredicted RBP10.64□□□□□ -0.71
HDAC6-228ENST00000486227 ELK4P28324 431 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 ABHD18Q0P651 414 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 MEP1AQ16819 746 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 LRRC26Q2I0M4 334 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 TUBA3EQ6PEY2 450 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 Q6ZNX1 250 aa10.64□□□□□ -0.71
HDAC6-228ENST00000486227 CD200R1Q8TD46 325 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms