RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 UBAP1Q9NZ09 502 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 TRAF3IP3Q9Y228 551 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 KCTD3Q9Y597 815 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 KAT6AQ92794 2004 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 ARHGEF35A5YM69 484 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 SRRM4A7MD48 611 aaKnown RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 AHRRA9YTQ3 701 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 TMEM189-UBE2V1I3L0A0 370 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 CLDN4O14493 209 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 B4GALT3O60512 393 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 CHRNGP07510 517 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 YES1P07947 543 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 ATP6V1C1P21283 382 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 CALB2P22676 271 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 MTCP1P56278 107 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 SLC25A3Q00325 362 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 UBE2V1Q13404 147 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 UGCGQ16739 394 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 KRTAP21-3Q3LHN1 58 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 SFRP4Q6FHJ7 346 aaPredicted RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 ARSKQ6UWY0 536 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 IL17RELQ6ZVW7 336 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 SLC24A5Q71RS6 500 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 NRARPQ7Z6K4 114 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 C1orf210Q8IVY1 113 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 ARHGAP24Q8N264 748 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 BMPERQ8N8U9 685 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 CMASQ8NFW8 434 aaPredicted RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 HMGCLL1Q8TB92 370 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 FEZF2Q8TBJ5 459 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 SLCO4A1Q96BD0 722 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 TSPYL1Q9H0U9 437 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 DPAGT1Q9H3H5 408 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 HIPK3Q9H422 1215 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 ZNF768Q9H5H4 540 aaKnown RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 HELTA6NFD8 242 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 C4orf47A7E2U8 309 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 ARHGEF9O43307 516 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 SPDEFO95238 335 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 ELFN1P0C7U0 828 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 HRH2P25021 359 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 ELAVL4P26378 380 aaKnown RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 RPS5P46782 204 aaKnown RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 MAPK12P53778 367 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 CXADRP78310 365 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 NAE1Q13564 534 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 KCNA10Q16322 511 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 SYT16Q17RD7 645 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 PNLIPRP3Q17RR3 467 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 PDLIM3Q53GG5 364 aaPredicted RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 TMEM41BQ5BJD5 291 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 FSCBQ5H9T9 825 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 LRRC73Q5JTD7 316 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 C10orf120Q5SQS8 335 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 PHYHD1Q5SRE7 291 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 AGBL2Q5U5Z8 902 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 LAIR1Q6GTX8 287 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 KIAA1161Q6NSJ0 714 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 DBX2Q6ZNG2 339 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 RAB3IL1Q8TBN0 382 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 FAR1Q8WVX9 515 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 LPPQ93052 612 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 NAP1L3Q99457 506 aaPredicted RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 GTPBP2Q9BX10 602 aaKnown RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 THAP2Q9H0W7 228 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 SLA2Q9H6Q3 261 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 LRRC40Q9H9A6 602 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 FANCEQ9HB96 536 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 RAB20Q9NX57 234 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 NYAP2Q9P242 653 aa3.13□□□□□ -1.91
SMC6-208ENST00000481708 ARPP21Q9UBL0 812 aaPredicted RBP3.13□□□□□ -1.91
SMC6-208ENST00000481708 CUL9Q8IWT3 2517 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 A0A087X0K7 114 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 FLRT2O43155 660 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ACSL4O60488 711 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 OR4F21O95013 312 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CLDN7O95471 211 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 WNT1P04628 370 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 DCTDP32321 178 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 RIPK4P57078 832 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ABATP80404 500 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 IRF8Q02556 426 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ABRQ12979 859 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 MELKQ14680 651 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CLPPQ16740 277 aaPredicted RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 KRT24Q2M2I5 525 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 HIKESHIQ53FT3 197 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 LRRC66Q68CR7 880 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 AADACL2Q6P093 401 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ZNF813Q6ZN06 617 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 FAM228AQ86W67 206 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CHSY1Q86X52 802 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CD302Q8IX05 232 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 FAM9CQ8IZT9 166 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 LEMD2Q8NC56 503 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 MNS1Q8NEH6 495 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 HDAC7Q8WUI4 952 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms