RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 CEACAM1P13688 526 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 CDH3P22223 829 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 ITGA3P26006 1051 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 CETN2P41208 172 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 NUMBP49757 651 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 CCL11P51671 97 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 CLCN4P51793 760 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 METAP1P53582 386 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 B3GALT5-AS1P59052 145 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 HERV-K104P63124 156 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 PITX1P78337 314 aaPredicted RBP4.87□□□□□ -1.63
COPA-203ENST00000481040 ZXDBP98169 803 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 Q0VFX4 171 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 TRAF3Q13114 568 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 SNX1Q13596 522 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 FHL2Q14192 279 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 TMEM41BQ5BJD5 291 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 CMPK2Q5EBM0 449 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 CFAP157Q5JU67 520 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 NKAIN2Q5VXU1 208 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 C8orf82Q6P1X6 216 aaPredicted RBP4.87□□□□□ -1.63
COPA-203ENST00000481040 RHBDF2Q6PJF5 856 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 FAM159AQ6UWV7 190 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 ZNF554Q86TJ5 538 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 FJX1Q86VR8 437 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 KMT5CQ86Y97 462 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 CCDC60Q8IWA6 550 aaPredicted RBP4.87□□□□□ -1.63
COPA-203ENST00000481040 CENPLQ8N0S6 344 aaPredicted RBP4.87□□□□□ -1.63
COPA-203ENST00000481040 ZNF444Q8N0Y2 327 aaPredicted RBP4.87□□□□□ -1.63
COPA-203ENST00000481040 KLHDC1Q8N7A1 406 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 TMEM99Q8N816 258 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 FADS6Q8N9I5 356 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 SMRP1Q8NCR6 262 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 TRPV3Q8NET8 790 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 OR1J1Q8NGS3 322 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 GRHL3Q8TE85 626 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 PHLDA1Q8WV24 401 aaPredicted RBP4.87□□□□□ -1.63
COPA-203ENST00000481040 DDB2Q92466 427 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 SEPT8Q92599 483 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 GLYATL1Q969I3 302 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 TUBGCP3Q96CW5 907 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 MAGED4Q96JG8 741 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 ZSCAN5AQ9BUG6 496 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 PUS3Q9BZE2 481 aaKnown RBP4.87□□□□□ -1.63
COPA-203ENST00000481040 TRIM6Q9C030 488 aaPredicted RBP4.87□□□□□ -1.63
COPA-203ENST00000481040 SPRTNQ9H040 489 aaPredicted RBP4.87□□□□□ -1.63
COPA-203ENST00000481040 RAVER2Q9HCJ3 691 aaKnown RBP4.87□□□□□ -1.63
COPA-203ENST00000481040 YAE1D1Q9NRH1 226 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 SLC38A7Q9NVC3 462 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 GTSE1Q9NYZ3 720 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 NCKAP1Q9Y2A7 1128 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 DMRT1Q9Y5R6 373 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 ABCC4O15439 1325 aa4.87□□□□□ -1.63
COPA-203ENST00000481040 A0A1B0GUL7 405 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 C4orf47A7E2U8 309 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 C2CD4DB7Z1M9 353 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 CXCL11O14625 94 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 OGTO15294 1046 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 MAGEB3O15480 346 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 SYT7O43581 403 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 TSC22D2O75157 780 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 MTX2O75431 263 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 CLN5O75503 358 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 HLA-DOBP13765 273 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 GNSP15586 552 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 CSTF2P33240 577 aaKnown RBP eCLIP4.86□□□□□ -1.633e-7■■□□□ 11.5
COPA-203ENST00000481040 DHPSP49366 369 aaPredicted RBP4.86□□□□□ -1.63
COPA-203ENST00000481040 CLDN17P56750 224 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 SPIBQ01892 262 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 RELQ04864 619 aaPredicted RBP4.86□□□□□ -1.63
COPA-203ENST00000481040 OPCMLQ14982 345 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 IL23RQ5VWK5 629 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 PCSK4Q6UW60 755 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 CDHR3Q6ZTQ4 885 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 EID3Q8N140 333 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 ZCCHC7Q8N3Z6 543 aaKnown RBP4.86□□□□□ -1.63
COPA-203ENST00000481040 LRRC17Q8N6Y2 441 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 PRR26Q8N8Z3 221 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 LRTM2Q8N967 370 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 ZNF114Q8NC26 417 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 OLIG1Q8TAK6 271 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 CTNNBL1Q8WYA6 563 aaPredicted RBP4.86□□□□□ -1.63
COPA-203ENST00000481040 PKNOX2Q96KN3 472 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 RBM38Q9H0Z9 239 aaKnown RBP4.86□□□□□ -1.63
COPA-203ENST00000481040 CSTL1Q9H114 145 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 MARCH7Q9H992 704 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 APOBEC3GQ9HC16 384 aaKnown RBP4.86□□□□□ -1.63
COPA-203ENST00000481040 CHST11Q9NPF2 352 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 TCF7L2Q9NQB0 619 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 FAM207AQ9NSI2 230 aaPredicted RBP4.86□□□□□ -1.63
COPA-203ENST00000481040 DDX28Q9NUL7 540 aaKnown RBP4.86□□□□□ -1.63
COPA-203ENST00000481040 SMPD3Q9NY59 655 aaPredicted RBP4.86□□□□□ -1.63
COPA-203ENST00000481040 VPS54Q9P1Q0 977 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 ZNHIT2Q9UHR6 403 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 SLC7A7Q9UM01 511 aa4.86□□□□□ -1.63
COPA-203ENST00000481040 A0A0G2JPF8 293 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 A0A0U1RQV5 110 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 HNRNPCL3B7ZW38 293 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 ZNF587BE7ETH6 402 aa4.85□□□□□ -1.63
COPA-203ENST00000481040 CSO75390 466 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms